RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 NBL1P41271 181 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 CBX1P83916 185 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 LCTLQ6UWM7 567 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 OR52B6Q8NGF0 335 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 AGAP11Q8TF27 550 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 MID1IP1Q9NPA3 183 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 GPRC5BQ9NZH0 403 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 HAO1Q9UJM8 370 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.82■■■□□ 2.04
BRF1-213ENST00000548421 KCNE2Q9Y6J6 123 aa27.82■■■□□ 2.04
BRF1-213ENST00000548421 A0A1W2PPV9 198 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 GIPC1O14908 333 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 EPORP19235 508 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 PKNOX1P55347 436 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 SH3BP2P78314 561 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 ZNF761Q86XN6 746 aaPredicted RBP27.81■■■□□ 2.04
BRF1-213ENST00000548421 ZNF781Q8N8C0 355 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 HAUS8Q9BT25 410 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 EPN3Q9H201 632 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 FAM86C1Q9NVL1 165 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 DYRK1BQ9Y463 629 aa27.81■■■□□ 2.04
BRF1-213ENST00000548421 LILRA5A6NI73 299 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 TRIM38O00635 465 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 CHRM5P08912 532 aaPredicted RBP27.8■■■□□ 2.04
BRF1-213ENST00000548421 NPPBP16860 134 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 MPSTP25325 297 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 ARL1P40616 181 aaPredicted RBP27.8■■■□□ 2.04
BRF1-213ENST00000548421 TRAF3Q13114 568 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 GPRIN3Q6ZVF9 776 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 ADGRF3Q8IZF5 1079 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 SLC38A3Q99624 504 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 NTMT1Q9BV86 223 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 DNAAF2Q9NVR5 837 aaKnown RBP27.8■■■□□ 2.04
BRF1-213ENST00000548421 TAC3Q9UHF0 121 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 PCDHB11Q9Y5F2 797 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 MUC6Q6W4X9 2439 aa27.8■■■□□ 2.04
BRF1-213ENST00000548421 RHPN2P1A8MT19 583 aa27.79■■■□□ 2.04
BRF1-213ENST00000548421 NUDT21O43809 227 aaKnown RBP27.79■■■□□ 2.04
BRF1-213ENST00000548421 ESRRBO95718 433 aa27.79■■■□□ 2.04
BRF1-213ENST00000548421 GNAZP19086 355 aa27.79■■■□□ 2.04
BRF1-213ENST00000548421 SH2D4BQ5SQS7 431 aa27.79■■■□□ 2.04
BRF1-213ENST00000548421 KIRREL3Q8IZU9 778 aa27.79■■■□□ 2.04
BRF1-213ENST00000548421 TBC1D10AQ9BXI6 508 aa27.79■■■□□ 2.04
BRF1-213ENST00000548421 NSRP1Q9H0G5 558 aaKnown RBP27.79■■■□□ 2.04
BRF1-213ENST00000548421 ZDHHC2Q9UIJ5 367 aa27.79■■■□□ 2.04
BRF1-213ENST00000548421 A0A1B0GTL3 188 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 BTN3A3O00478 584 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 CLGNO14967 610 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 LMNAP02545 664 aaKnown RBP27.78■■■□□ 2.04
BRF1-213ENST00000548421 GLB1P16278 677 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 PRDX3P30048 256 aaKnown RBP27.78■■■□□ 2.04
BRF1-213ENST00000548421 SUZ12Q15022 739 aaKnown RBP27.78■■■□□ 2.04
BRF1-213ENST00000548421 SF3A2Q15428 464 aaKnown RBP27.78■■■□□ 2.04
BRF1-213ENST00000548421 SYVN1Q86TM6 617 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 FAM181AQ8N9Y4 354 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 PIWIL2Q8TC59 973 aaKnown RBP27.78■■■□□ 2.04
BRF1-213ENST00000548421 AGR3Q8TD06 166 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 SLC22A18Q96BI1 424 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 ACAT2Q9BWD1 397 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 TWSG1Q9GZX9 223 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 ACTR8Q9H981 624 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 LRIT1Q9P2V4 623 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 ZNF225Q9UK10 706 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 PCDHGB2Q9Y5G2 931 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 RNF215Q9Y6U7 377 aa27.78■■■□□ 2.04
BRF1-213ENST00000548421 OR6C74A6NCV1 312 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 E7EQ34 232 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 SIGLEC6O43699 453 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 PRICKLE3O43900 615 aaPredicted RBP27.77■■■□□ 2.04
BRF1-213ENST00000548421 EBLN1P0CF75 366 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 PSMB5P28074 263 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 PEBP1P30086 187 aaKnown RBP27.77■■■□□ 2.04
BRF1-213ENST00000548421 RPL14P50914 215 aaKnown RBP27.77■■■□□ 2.04
BRF1-213ENST00000548421 ERVPABLB-1P60509 514 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 SPEM2Q0P670 501 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 KIR2DS3Q14952 304 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 MILR1Q7Z6M3 343 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 EID2Q8N6I1 236 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 DCBLD1Q8N8Z6 715 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 OR4F6Q8NGB9 312 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 SLC5A11Q8WWX8 675 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 NEIL2Q969S2 332 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 APOLD1Q96LR9 279 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 CDK15Q96Q40 435 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 TNFRSF12AQ9NP84 129 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 PNPOQ9NVS9 261 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 SPHK1Q9NYA1 384 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 NCDNQ9UBB6 729 aa27.77■■■□□ 2.04
BRF1-213ENST00000548421 MARCOQ9UEW3 520 aaPredicted RBP27.77■■■□□ 2.04
BRF1-213ENST00000548421 PIPSLA2A3N6 862 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 LRP3O75074 770 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 CLDN9O95484 217 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 DRD4P21917 467 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 PCDH1Q08174 1060 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 NR0B2Q15466 257 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 LETMD1Q6P1Q0 360 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 ZNF438Q7Z4V0 828 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 C17orf64Q86WR6 236 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 OOSP2Q86WS3 158 aa27.76■■■□□ 2.04
BRF1-213ENST00000548421 OR2A1Q8NGT9 310 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms