RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 ZNF624Q9P2J8 865 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-203ENST00000547825 ZNF222Q9UK12 451 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 EMCNQ9ULC0 261 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 CNTN6Q9UQ52 1028 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 TCAF1Q9Y4C2 921 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 SLC12A8A0AV02 714 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 TBKBP1A7MCY6 615 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 PMM2O15305 246 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 OR4F21O95013 312 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 LYPLA2O95372 231 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 MLNP12872 115 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 AKR1A1P14550 325 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 CYP2B6P20813 491 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 ZNF132P52740 706 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 OR2B6P58173 313 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 NFATC3Q12968 1075 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 PTPRCAPQ14761 206 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 TSNQ15631 228 aaKnown RBP5.36□□□□□ -1.55
LIMA1-203ENST00000547825 TCTN1Q2MV58 587 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 UAP1L1Q3KQV9 507 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 NIPAL1Q6NVV3 410 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 PLET1Q6UQ28 207 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 FAM131AQ6UXB0 335 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 DCDC5Q6ZRR9 648 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 GPRIN3Q6ZVF9 776 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 SLC26A9Q7LBE3 791 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 TXNDC5Q8NBS9 432 aaKnown RBP5.36□□□□□ -1.55
LIMA1-203ENST00000547825 FAM110BQ8TC76 370 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 DNAJB3Q8WWF6 145 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 SELENOMQ8WWX9 145 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 CENPIQ92674 756 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-203ENST00000547825 RELTQ969Z4 430 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 SH3KBP1Q96B97 665 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 VAT1Q99536 393 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 NTPCRQ9BSD7 190 aaKnown RBP5.36□□□□□ -1.55
LIMA1-203ENST00000547825 ST6GALNAC4Q9H4F1 302 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 SP140LQ9H930 580 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 PLK2Q9NYY3 685 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 EVLQ9UI08 416 aaPredicted RBP5.36□□□□□ -1.55
LIMA1-203ENST00000547825 GNPTGQ9UJJ9 305 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 POU2F3Q9UKI9 436 aa5.36□□□□□ -1.55
LIMA1-203ENST00000547825 MGAT4DA6NG13 374 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 E7ESA3 106 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 PPEF2O14830 753 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 ULK1O75385 1050 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 EOMESO95936 686 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 CYBBP04839 570 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 SERPINF2P08697 491 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 CRATP43155 626 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 SCAND1P57086 179 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 SNRPNP63162 240 aaKnown RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 MGAT3Q09327 533 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 HSPA14Q0VDF9 509 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 ILF2Q12905 390 aaKnown RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 TP53BP2Q13625 1128 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 BOP1Q14137 746 aaKnown RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 TMEM177Q53S58 311 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 MARCH8Q5T0T0 291 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 SULT1C3Q6IMI6 304 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 SLC2A7Q6PXP3 512 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 KRT74Q7RTS7 529 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 GPR180Q86V85 440 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 TRIM69Q86WT6 500 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 SLC34A3Q8N130 599 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 PPTC7Q8NI37 304 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 CNIH3Q8TBE1 160 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 TMEM203Q969S6 136 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 SIPA1Q96FS4 1042 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 AHCYL2Q96HN2 611 aaKnown RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 VPS35Q96QK1 796 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 TTYH2Q9BSA4 534 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 CINPQ9BW66 212 aaPredicted RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 DCSTAMPQ9H295 470 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 NXF3Q9H4D5 531 aaKnown RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 RMND5AQ9H871 391 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 DYRK4Q9NR20 520 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 KLHL1Q9NR64 748 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 GALPQ9UBC7 116 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 VWA8A3KMH1 1905 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 MIA3Q5JRA6 1907 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 MEGF11A6BM72 1044 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 NPEPPSL1A6NEC2 478 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 ZSCAN5BA6NJL1 495 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 A8MT66 165 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 ZNF99A8MXY4 864 aaPredicted RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 H3BM21 787 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 H3BMQ9 156 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 ARVCFO00192 962 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 RAMP2O60895 175 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 SNNO75324 88 aaPredicted RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 CXCL10P02778 98 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 IFNA8P32881 189 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 RCVRNP35243 200 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 OR1G1P47890 313 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 RFX3P48380 749 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 UFM1P61960 85 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 NCS1P62166 190 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 TRAP1Q12931 704 aaKnown RBP5.35□□□□□ -1.55
LIMA1-203ENST00000547825 DAG1Q14118 895 aa5.35□□□□□ -1.55
LIMA1-203ENST00000547825 NCF4Q15080 339 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms