RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 WASHC2DQ5SRD0 308 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 KIAA0930Q6ICG6 404 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-204ENST00000547486 NEPROQ6NW34 567 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 FBXO42Q6P3S6 717 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 SHISA6Q6ZSJ9 500 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 METTL27Q8N6F8 245 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-204ENST00000547486 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 DLG3Q92796 817 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 PNPLA2Q96AD5 504 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 TCF12Q99081 682 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 SLC30A3Q99726 388 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 SELENOSQ9BQE4 189 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 MESP1Q9BRJ9 268 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 RAB11FIP5Q9BXF6 653 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 SYNPO2LQ9H987 977 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 SLAMF7Q9NQ25 335 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 INTS7Q9NVH2 962 aaKnown RBP12.78□□□□□ -0.36
CPSF6-204ENST00000547486 C5AR2Q9P296 337 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 G3BP2Q9UN86 482 aaKnown RBP12.78□□□□□ -0.36
CPSF6-204ENST00000547486 PPP2R2CQ9Y2T4 447 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 KLK4Q9Y5K2 254 aa12.78□□□□□ -0.36
CPSF6-204ENST00000547486 DOPEY2Q9Y3R5 2298 aa12.77□□□□□ -0.36
CPSF6-204ENST00000547486 A0A0J9YVX5 310 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 BLACEA4D250 179 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 ARHGEF33A8MVX0 844 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 TCP11X1B4DZS4 312 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 ALOX12BO75342 701 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 ESR1P03372 595 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 CCNFP41002 786 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 CLCN7P51798 805 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 ADARP55265 1226 aaKnown RBP12.77□□□□□ -0.37
CPSF6-204ENST00000547486 SOX8P57073 446 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 ANKRD20A4Q4UJ75 823 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 TCTE1Q5JU00 501 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 VWA5B1Q5TIE3 1220 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 HPS6Q86YV9 775 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 CILP2Q8IUL8 1156 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 AGGF1Q8N302 714 aaeCLIP12.77□□□□□ -0.37
CPSF6-204ENST00000547486 RASGEF1CQ8N431 466 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 CLEC1AQ8NC01 280 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 MAGOHBQ96A72 148 aaKnown RBP12.77□□□□□ -0.37
CPSF6-204ENST00000547486 FKBP10Q96AY3 582 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 FOPNLQ96NB1 174 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 SPSB2Q99619 263 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 ACAT2Q9BWD1 397 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 SLC26A1Q9H2B4 701 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 CTSFQ9UBX1 484 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 MAU2Q9Y6X3 613 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 PTPN13Q12923 2485 aa12.77□□□□□ -0.37
CPSF6-204ENST00000547486 ZCWPW2A0A1B0GU75 182 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 HYKKA2RU49 373 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 VSTM2BA6NLU5 285 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 GOLGA8MH3BSY2 632 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 AGPSO00116 658 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SOCS6O14544 535 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SRPX2O60687 465 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SEMA7AO75326 666 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 PSIP1O75475 530 aaKnown RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 FKBP9O95302 570 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 ALBP02768 609 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 ERGP11308 486 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 PKMP14618 531 aaKnown RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 OGNP20774 298 aaKnown RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 MMP11P24347 488 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 ATP5DP30049 168 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 CTBP1Q13363 440 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 MRPL49Q13405 166 aaKnown RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 KLHL38Q2WGJ6 581 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 RNF187Q5TA31 235 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 YOD1Q5VVQ6 348 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 CASC4Q6P4E1 433 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 ZNF549Q6P9A3 640 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SUSD1Q6UWL2 747 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 KIRREL2Q6UWL6 708 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 IGFL3Q6UXB1 125 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 DENND6AQ8IWF6 608 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 OR9A1PQ8NGU1 263 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 MAGEC3Q8TD91 643 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 INPP5DQ92835 1189 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SNRNP40Q96DI7 357 aaKnown RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 PKP4Q99569 1192 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 DPH7Q9BTV6 452 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SOX17Q9H6I2 414 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 WDR54Q9H977 334 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SLC6A20Q9NP91 592 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 ATP13A2Q9NQ11 1180 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SPATA7Q9P0W8 599 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 ZC3H7BQ9UGR2 993 aaKnown RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 CDC23Q9UJX2 597 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 FBXL4Q9UKA2 621 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 MED16Q9Y2X0 877 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 HS3ST3B1Q9Y662 390 aa12.76□□□□□ -0.37
CPSF6-204ENST00000547486 SNRNP200O75643 2136 aaKnown RBP12.76□□□□□ -0.37
CPSF6-204ENST00000547486 IGKV1-8A0A0C4DH67 115 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 FAM237BA0A1B0GVD1 139 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 MAGEB16A2A368 324 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 OR2A25A4D2G3 310 aa12.75□□□□□ -0.37
CPSF6-204ENST00000547486 SDR42E2A6NKP2 422 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms