RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 AASSQ9UDR5 926 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 B4GAT1O43505 415 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SH3BP5O60239 455 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CD22P20273 847 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 FSHRP23945 695 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 HRH2P25021 359 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CSNK1DP48730 415 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CYP4F3Q08477 520 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 PDCD4Q53EL6 469 aaKnown RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 PDE12Q6L8Q7 609 aaKnown RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 PRMT9Q6P2P2 845 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 RBM44Q6ZP01 1051 aaKnown RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 GPR180Q86V85 440 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 ZNF513Q8N8E2 541 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 NEIL2Q969S2 332 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 TMIGD2Q96BF3 282 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 TPD52L3Q96J77 140 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 TMEM121BQ9BXQ6 578 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 REXO4Q9GZR2 422 aaKnown RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 ADNPQ9H2P0 1102 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 PDP2Q9P2J9 529 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SH2B3Q9UQQ2 575 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CKAP5Q14008 2032 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SCN3AQ9NY46 2000 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 RTCAO00442 366 aaKnown RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CASQ2O14958 399 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SLC31A1O15431 190 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 ETHE1O95571 254 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CYP4B1P13584 511 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SDC1P18827 310 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 GDI1P31150 447 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 MC1RQ01726 317 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CNTN1Q12860 1018 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 C16orf72Q14CZ0 275 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 EGFLAMQ63HQ2 1017 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 TTC33Q6PID6 262 aaPredicted RBP12.35□□□□□ -0.43
SCAF11-209ENST00000547018 GALNT5Q7Z7M9 940 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 PARP8Q8N3A8 854 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 GTF2H4Q92759 462 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 MACROD1Q9BQ69 325 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SMOXQ9NWM0 555 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 SLC25A37Q9NYZ2 338 aa12.35□□□□□ -0.43
SCAF11-209ENST00000547018 CCDC88CQ9P219 2028 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 TANC1Q9C0D5 1861 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 hCG_2039718K7EN88 272 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 CLOCKO15516 846 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 C8BP07358 591 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 PRR35P0CG20 571 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 ALDH9A1P49189 494 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 PFN3P60673 137 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 RPS13P62277 151 aaKnown RBP12.34□□□□□ -0.43
SCAF11-209ENST00000547018 TRAP1Q12931 704 aaKnown RBP12.34□□□□□ -0.43
SCAF11-209ENST00000547018 LIN52Q52LA3 116 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 ERMP1Q7Z2K6 904 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 CATSPER1Q8NEC5 780 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 FLCNQ8NFG4 579 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 OR5AK3PQ8NH89 298 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 OSCP1Q8WVF1 389 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 MAL2Q969L2 176 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 NUS1Q96E22 293 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 ZSCAN5AQ9BUG6 496 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 BRINP2Q9C0B6 783 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 SLC52A3Q9NQ40 469 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 CCM2LQ9NUG4 571 aaPredicted RBP12.34□□□□□ -0.43
SCAF11-209ENST00000547018 MRGBPQ9NV56 204 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 ATXN10Q9UBB4 475 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 RAPGEFL1Q9UHV5 662 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 MGAT4DA6NG13 374 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 SGTAO43765 313 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 MTHFRP42898 656 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 SLC14A1Q13336 389 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 PRSS36Q5K4E3 855 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 TMTC4Q5T4D3 741 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 NOXRED1Q6NXP6 359 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 EPHX4Q8IUS5 362 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 TRPV3Q8NET8 790 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 ARMC5Q96C12 935 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 LGR4Q9BXB1 951 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 C1QTNF3Q9BXJ4 246 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 MTIF3Q9H2K0 278 aaKnown RBP12.34□□□□□ -0.43
SCAF11-209ENST00000547018 XKR8Q9H6D3 395 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 CARS2Q9HA77 564 aaKnown RBP12.34□□□□□ -0.43
SCAF11-209ENST00000547018 C5AR2Q9P296 337 aa12.34□□□□□ -0.43
SCAF11-209ENST00000547018 STOX2Q9P2F5 926 aaPredicted RBP12.34□□□□□ -0.43
SCAF11-209ENST00000547018 A0A1W2PP55 124 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 AREL1O15033 823 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 MID1O15344 667 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 C8GP07360 202 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 ANXA4P09525 319 aaPredicted RBP12.33□□□□□ -0.44
SCAF11-209ENST00000547018 LAMP1P11279 417 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 GSTT1P30711 240 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 MMP12P39900 470 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 DGKEP52429 567 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 PWP1Q13610 501 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 NADK2Q4G0N4 442 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 HENMT1Q5T8I9 393 aaKnown RBP12.33□□□□□ -0.44
SCAF11-209ENST00000547018 ARMC3Q5W041 872 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 OR5AR1Q8NGP9 310 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 CXorf40AQ8TE69 158 aa12.33□□□□□ -0.44
SCAF11-209ENST00000547018 OR4K3Q96R72 315 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms