RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 OR2L3Q8NG85 312 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 OR2A1Q8NGT9 310 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 FAM45AQ8TCE6 357 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 PROKR1Q8TCW9 393 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 C16orf45Q96MC5 204 aaPredicted RBP15.28■□□□□ 0.04
DDX54-204ENST00000546898 C17orf62Q9BQA9 187 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 PHACTR1Q9C0D0 580 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 CHST8Q9H2A9 424 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 ADNPQ9H2P0 1102 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 ACTL8Q9H568 366 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 AKIRIN1Q9H9L7 192 aaPredicted RBP15.28■□□□□ 0.04
DDX54-204ENST00000546898 NSMCE4AQ9NXX6 385 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 EURLQ9NYK6 297 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 ANKMY1Q9P2S6 941 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 CDC23Q9UJX2 597 aa15.28■□□□□ 0.04
DDX54-204ENST00000546898 UTP11Q9Y3A2 253 aaKnown RBP15.28■□□□□ 0.04
DDX54-204ENST00000546898 HCRTR1O43613 425 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 C1QL1O75973 258 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 CCNDBP1O95273 360 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 PRB1P04280 392 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 AGXTP21549 392 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 MCM3P25205 808 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 PSMB5P28074 263 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 CMPK1P30085 196 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 GRIA3P42263 894 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 CCR10P46092 362 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 PNLIPRP1P54315 467 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 MRPS25P82663 173 aaKnown RBP15.27■□□□□ 0.04
DDX54-204ENST00000546898 TIAL1Q01085 375 aaKnown RBP eCLIP15.27■□□□□ 0.04
DDX54-204ENST00000546898 CAV1Q03135 178 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 C19orf57Q0VDD7 668 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 ILF2Q12905 390 aaKnown RBP15.27■□□□□ 0.04
DDX54-204ENST00000546898 SP140Q13342 867 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 FASTKD3Q14CZ7 662 aaKnown RBP15.27■□□□□ 0.04
DDX54-204ENST00000546898 TCTE1Q5JU00 501 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 ZNF385CQ66K41 422 aaPredicted RBP15.27■□□□□ 0.04
DDX54-204ENST00000546898 FCRL6Q6DN72 434 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 UBE2R2Q712K3 238 aaPredicted RBP15.27■□□□□ 0.04
DDX54-204ENST00000546898 PIWIL4Q7Z3Z4 852 aaKnown RBP15.27■□□□□ 0.04
DDX54-204ENST00000546898 SYVN1Q86TM6 617 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 SLC26A11Q86WA9 606 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 MYO1HQ8N1T3 1032 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 DLG3Q92796 817 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 PKP4Q99569 1192 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 MIPEPQ99797 713 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 NLNQ9BYT8 704 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 ENAMQ9NRM1 1142 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 IRAK4Q9NWZ3 460 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 MOCS1Q9NZB8 636 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 GRHL1Q9NZI5 618 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 SLC17A6Q9P2U8 582 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 TUBD1Q9UJT1 453 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 POLHQ9Y253 713 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 FARSAQ9Y285 508 aaKnown RBP15.27■□□□□ 0.04
DDX54-204ENST00000546898 KLHL20Q9Y2M5 609 aa15.27■□□□□ 0.04
DDX54-204ENST00000546898 C9J4A7 227 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 SLC16A8O95907 504 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 C8GP07360 202 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 FDXRP22570 491 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 RPA3P35244 121 aaPredicted RBP15.26■□□□□ 0.03
DDX54-204ENST00000546898 CDKN2DP55273 166 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 PDAP1Q13442 181 aaKnown RBP15.26■□□□□ 0.03
DDX54-204ENST00000546898 ERV3-1Q14264 604 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 FASTKQ14296 549 aaKnown RBP15.26■□□□□ 0.03
DDX54-204ENST00000546898 HECTD2Q5U5R9 776 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 YOD1Q5VVQ6 348 aaPredicted RBP15.26■□□□□ 0.03
DDX54-204ENST00000546898 FAM198BQ6UWH4 519 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 MCATQ8IVS2 390 aaKnown RBP15.26■□□□□ 0.03
DDX54-204ENST00000546898 PALM2Q8IXS6 379 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 EXD3Q8N9H8 876 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 PYROXD1Q8WU10 500 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 ZNF480Q8WV37 535 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 APOBEC4Q8WW27 367 aaKnown RBP15.26■□□□□ 0.03
DDX54-204ENST00000546898 ZNF285Q96NJ3 590 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 NDC1Q9BTX1 674 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 DHRS4Q9BTZ2 278 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 SEMA4CQ9C0C4 833 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 SPRTNQ9H040 489 aaPredicted RBP15.26■□□□□ 0.03
DDX54-204ENST00000546898 TXLNGQ9NUQ3 528 aa15.26■□□□□ 0.03
DDX54-204ENST00000546898 CDC14CA4D256 554 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 OR2A25A4D2G3 310 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 E7ENX8 843 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 SLC16A5O15375 505 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 SYF2O95926 243 aaKnown RBP15.25■□□□□ 0.03
DDX54-204ENST00000546898 TUBB4AP04350 444 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 CAPN1P07384 714 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 FAM87AP0C7U9 286 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 GCGRP47871 477 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 ARSFP54793 590 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 POLE2P56282 527 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 TAP2Q03519 686 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 UGT8Q16880 541 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 WHAMMP3Q1A5X7 153 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 DEFB109BQ30KR1 87 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 PTCHD3Q3KNS1 767 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 ATP1A1-AS1Q5TC04 95 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 PAQR3Q6TCH7 311 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 RNF44Q7L0R7 432 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 ZNF843Q8N446 348 aa15.25■□□□□ 0.03
DDX54-204ENST00000546898 ZNF655Q8N720 491 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms