RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GPC4O75487 556 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SLCO2B1O94956 709 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 LDOC1O95751 146 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SHBGP04278 402 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 NUDT17P0C025 328 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 MYF5P13349 255 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 CKMT2P17540 419 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 CSRP1P21291 193 aaKnown RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SAT1P21673 171 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 CD9P21926 228 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 PDHA2P29803 388 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 GDNFP39905 211 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 MSH2P43246 934 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ACADVLP49748 655 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 RGS4P49798 205 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SERPINB8P50452 374 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SERPINB9P50453 376 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SLC12A2P55011 1212 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 TAS2R39P59534 338 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 TIAL1Q01085 375 aaKnown RBP eCLIP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 POU4F1Q01851 419 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 HHEXQ03014 270 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 DNAJC3Q13217 504 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 BIRC2Q13490 618 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SLC29A2Q14542 456 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ZNF460Q14592 562 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 CLCA4Q14CN2 919 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ZKSCAN8Q15776 578 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 RPE65Q16518 533 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ACSBG2Q5FVE4 666 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 GRTP1Q5TC63 336 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 CAPRIN2Q6IMN6 1127 aaKnown RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 OGFOD2Q6N063 350 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 LRRC8EQ6NSJ5 796 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 UGT3A1Q6NUS8 523 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 IYDQ6PHW0 289 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ABRAXAS1Q6UWZ7 409 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 UNC5DQ6UXZ4 953 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 PIWIL4Q7Z3Z4 852 aaKnown RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SLC9B2Q86UD5 537 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 C17orf82Q86X59 251 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 DCUN1D3Q8IWE4 304 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ARL14Q8N4G2 192 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ACVR1CQ8NER5 493 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 DCAKDQ8WVC6 231 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 FAM168AQ92567 244 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 LINGO1Q96FE5 620 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 TSPAN17Q96FV3 270 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 HGH1Q9BTY7 390 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SLC32A1Q9H598 525 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 CAB39LQ9H9S4 337 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 PPCSQ9HAB8 311 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 POPDC3Q9HBV1 291 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 C19orf73Q9NVV2 129 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 PSMC3IPQ9P2W1 217 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-211ENST00000546304 GALPQ9UBC7 116 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 CPNE7Q9UBL6 633 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 FETUBQ9UGM5 382 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ZNF180Q9UJW8 692 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 SLC39A10Q9ULF5 831 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 ASF1AQ9Y294 204 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 DHRS7Q9Y394 339 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 HEBP2Q9Y5Z4 205 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 RNF215Q9Y6U7 377 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 HEATR5BQ9P2D3 2071 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 AKAP13Q12802 2813 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 IGF2RP11717 2491 aa6.16□□□□□ -1.42
PRKDC-211ENST00000546304 FRYQ5TBA9 3013 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 EME2A4GXA9 379 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-211ENST00000546304 SMIM23A6NLE4 172 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 RHPN2P1A8MT19 583 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 PHGDHO43175 533 aaKnown RBP6.15□□□□□ -1.42
PRKDC-211ENST00000546304 TNFSF14O43557 240 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 RFPL3O75679 317 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 KRT38O76015 456 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 WISP3O95389 354 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-211ENST00000546304 TSPAN12O95859 305 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 VIPP01282 170 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 ALDOAP04075 364 aaKnown RBP6.15□□□□□ -1.42
PRKDC-211ENST00000546304 RPN2P04844 631 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 GP1BAP07359 652 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 SLC35E2BP0CK96 405 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 CBSLP0DN79 551 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 STMN1P16949 149 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 SDHBP21912 280 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 VAMP1P23763 118 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 ACP1P24666 158 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 CNTFP26441 200 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 ACADLP28330 430 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 NDUFS1P28331 727 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 GCAP28676 217 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 CBSP35520 551 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 SKIV2L2P42285 1042 aaKnown RBP6.15□□□□□ -1.42
PRKDC-211ENST00000546304 MAPK9P45984 424 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 BDKRB1P46663 353 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 CAPZBP47756 277 aa6.15□□□□□ -1.42
PRKDC-211ENST00000546304 DUSP3P51452 185 aaPredicted RBP6.15□□□□□ -1.42
PRKDC-211ENST00000546304 NOVA1P51513 510 aaKnown RBP6.15□□□□□ -1.42
PRKDC-211ENST00000546304 PGGT1BP53609 377 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms