RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ATL1Q8WXF7 558 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 MED8Q96G25 268 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 NAF1Q96HR8 494 aaKnown RBP16.21■□□□□ 0.19
LTBR-215ENST00000546296 DCBLD2Q96PD2 775 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 ATG10Q9H0Y0 220 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 SNX15Q9NRS6 342 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 ZNF180Q9UJW8 692 aa16.21■□□□□ 0.19
LTBR-215ENST00000546296 A0A087X1B8 175 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 A0A1W2PPV9 198 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 HMX2A2RU54 273 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 KRT37O76014 449 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 CCNDBP1O95273 360 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 WISP3O95389 354 aaPredicted RBP16.2■□□□□ 0.18
LTBR-215ENST00000546296 C2P06681 752 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 SLC35E2BP0CK96 405 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 FGF5P12034 268 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 CD82P27701 267 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 NAE1Q13564 534 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 ZIC1Q15915 447 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 KIF26BQ2KJY2 2108 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 KIAA1614Q5VZ46 1190 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 WDR93Q6P2C0 686 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 FIGLAQ6QHK4 219 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 SBSNQ6UWP8 590 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 CCDC91Q7Z6B0 441 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 PROSER1Q86XN7 944 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 ZNF248Q8NDW4 579 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 OR2L3Q8NG85 312 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 OR2A1Q8NGT9 310 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 SNIP1Q8TAD8 396 aaKnown RBP16.2■□□□□ 0.18
LTBR-215ENST00000546296 UBXN10Q96LJ8 280 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 EGFL8Q99944 293 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 VPS11Q9H270 941 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 NMRAL1Q9HBL8 299 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 MRPS30Q9NP92 439 aaKnown RBP16.2■□□□□ 0.18
LTBR-215ENST00000546296 CCDC177Q9NQR7 707 aaPredicted RBP16.2■□□□□ 0.18
LTBR-215ENST00000546296 TAC3Q9UHF0 121 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 SERTAD3Q9UJW9 196 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 ZMIZ1Q9ULJ6 1067 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 OARD1Q9Y530 152 aa16.2■□□□□ 0.18
LTBR-215ENST00000546296 A0A096LPK6 155 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 TMEM150CB9EJG8 249 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 TAF4O00268 1085 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 ANXA5P08758 320 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 SNRPAP09012 282 aaKnown RBP16.19■□□□□ 0.18
LTBR-215ENST00000546296 LTA4HP09960 611 aaKnown RBP16.19■□□□□ 0.18
LTBR-215ENST00000546296 CD1DP15813 335 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 SLC26A3P40879 764 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 GRIA3P42263 894 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 NAA25Q14CX7 972 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 ST3GAL2Q16842 350 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
LTBR-215ENST00000546296 LRRC69Q6ZNQ3 347 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 CDHR3Q6ZTQ4 885 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 GPSM1Q86YR5 675 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 OR8K5Q8NH50 307 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 KCNE4Q8WWG9 221 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 ZUFSPQ96AP4 578 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 FBXL8Q96CD0 374 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 PARD6BQ9BYG5 372 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 ULBP3Q9BZM4 244 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 PCBD2Q9H0N5 130 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 EPB41L4BQ9H329 900 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 FAM60AQ9NP50 221 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 IRAK4Q9NWZ3 460 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 RNF112Q9ULX5 631 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 ACACBO00763 2458 aa16.19■□□□□ 0.18
LTBR-215ENST00000546296 IGF2RP11717 2491 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 TARM1B6A8C7 271 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 TRIM49D1C9J1S8 452 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 STMND1H3BQB6 276 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 STK17BO94768 372 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 ALDOAP04075 364 aaKnown RBP16.18■□□□□ 0.18
LTBR-215ENST00000546296 S100BP04271 92 aaPredicted RBP16.18■□□□□ 0.18
LTBR-215ENST00000546296 TFEBP19484 476 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 CCND1P24385 295 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 GMPRP36959 345 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 TBPL1P62380 186 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 ABATP80404 500 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 PRDX1Q06830 199 aaKnown RBP16.18■□□□□ 0.18
LTBR-215ENST00000546296 PPP1R3AQ16821 1122 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 FAM83EQ2M2I3 478 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 PRAMEF13Q5VWM6 474 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 ICE2Q659A1 982 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 FCRL6Q6DN72 434 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 CAPN13Q6MZZ7 669 aaPredicted RBP16.18■□□□□ 0.18
LTBR-215ENST00000546296 LRRC56Q8IYG6 542 aaPredicted RBP16.18■□□□□ 0.18
LTBR-215ENST00000546296 DNAJC22Q8N4W6 341 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 KIAA1191Q96A73 305 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 ZNF501Q96CX3 271 aaPredicted RBP16.18■□□□□ 0.18
LTBR-215ENST00000546296 RNF31Q96EP0 1072 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 DPH7Q9BTV6 452 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 CHRNA10Q9GZZ6 450 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 ALG9Q9H6U8 611 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 ACSL6Q9UKU0 697 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 PLCL2Q9UPR0 1127 aa16.18■□□□□ 0.18
LTBR-215ENST00000546296 IQANK1A0A1B0GTG1 560 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 NCF1BA6NI72 391 aaPredicted RBP16.17■□□□□ 0.18
LTBR-215ENST00000546296 NCF1CA8MVU1 366 aaPredicted RBP16.17■□□□□ 0.18
LTBR-215ENST00000546296 KLK10O43240 276 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms