RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 VLDLRP98155 873 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 ALG1LQ6GMV1 187 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.83□□□□□ -0.19
SRP54-202ENST00000546080 AGMOQ6ZNB7 445 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 ASCC1Q8N9N2 400 aaKnown RBP13.83□□□□□ -0.19
SRP54-202ENST00000546080 LPCAT1Q8NF37 534 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 SNX18Q96RF0 628 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 EGFL8Q99944 293 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 TINF2Q9BSI4 451 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 RNF167Q9H6Y7 350 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 THUMPD1Q9NXG2 353 aaKnown RBP13.83□□□□□ -0.19
SRP54-202ENST00000546080 QPCTLQ9NXS2 382 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 RPS6KA6Q9UK32 745 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 SCML2Q9UQR0 700 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 PTPRDP23468 1912 aa13.83□□□□□ -0.19
SRP54-202ENST00000546080 NLRC5Q86WI3 1866 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 DRGXA6NNA5 263 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 LOC110117498-PIK3R3F6TDL0 507 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 TPD52L2O43399 206 aaKnown RBP13.83□□□□□ -0.2
SRP54-202ENST00000546080 WDR47O94967 919 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 SNX4O95219 450 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 FKBP9O95302 570 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 POMCP01189 267 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 OR4Q2P0C623 313 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 CDKN2CP42773 168 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 PTGER3P43115 390 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 MAPKAPK2P49137 400 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 TRIM46Q7Z4K8 759 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 MIB1Q86YT6 1006 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 EFHBQ8N7U6 833 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 ZNF675Q8TD23 568 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 PIK3R3Q92569 461 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 ULK4Q96C45 1275 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 CINPQ9BW66 212 aaPredicted RBP13.83□□□□□ -0.2
SRP54-202ENST00000546080 OR51E2Q9H255 320 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 TNKS2Q9H2K2 1166 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 ELOVL2Q9NXB9 296 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 ABI2Q9NYB9 513 aaPredicted RBP13.83□□□□□ -0.2
SRP54-202ENST00000546080 WWOXQ9NZC7 414 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 PSORS1C1Q9UIG5 152 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 SNX6Q9UNH7 406 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 ST3GAL5Q9UNP4 418 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 DHRS7Q9Y394 339 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 PCDHGA6Q9Y5G7 932 aa13.83□□□□□ -0.2
SRP54-202ENST00000546080 NOTOA8MTQ0 251 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 M0QZQ0 153 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 STX7O15400 261 aaKnown RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 TAPBPO15533 448 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SSX4O60224 188 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 GLUD1P00367 558 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 GRK5P34947 590 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SOX6P35712 828 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 HTR3AP46098 478 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 ZFP69Q49AA0 526 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 INO80DQ53TQ3 878 aaPredicted RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 FAHD1Q6P587 224 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 RNF165Q6ZSG1 346 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 VTCN1Q7Z7D3 282 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 GALNT10Q86SR1 603 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 GATAD2AQ86YP4 633 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 Q96MT0 163 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 RNF38Q9H0F5 515 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 AASDHPPTQ9NRN7 309 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SIRT5Q9NXA8 310 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 ARIH1Q9Y4X5 557 aaPredicted RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 PCDHGA3Q9Y5H0 932 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 LYVE1Q9Y5Y7 322 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 GOLGA8CPA6NN73 597 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 EVPLLA8MZ36 301 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 M0QZ92 97 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 MANBAO00462 879 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 RFXANKO14593 260 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SCO2O43819 266 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 TSPAN3O60637 253 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 TBX18O95935 607 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 VIPP01282 170 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 C9P02748 559 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 DNTTP04053 509 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SEMG1P04279 462 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 CDK1P06493 297 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 HOXB9P17482 250 aaPredicted RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 POLR2EP19388 210 aaKnown RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 PSMA3P25788 255 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SLC19A1P41440 591 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 GDF5P43026 501 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 RGRP47804 291 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 UGT2B15P54855 530 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SLC14A1Q13336 389 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 TTLL9Q3SXZ7 439 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SLC39A12Q504Y0 691 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 SOWAHCQ53LP3 525 aaPredicted RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 GPR153Q6NV75 609 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 ZCCHC8Q6NZY4 707 aaKnown RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 UBQLNLQ8IYU4 475 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 ELMO1Q92556 727 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 MTFMTQ96DP5 389 aaKnown RBP13.82□□□□□ -0.2
SRP54-202ENST00000546080 HRASLS5Q96KN8 279 aa13.82□□□□□ -0.2
SRP54-202ENST00000546080 DHRS1Q96LJ7 313 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms