RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 SNX21Q969T3 373 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 FOXRED1Q96CU9 486 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF599Q96NL3 588 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 GBP4Q96PP9 640 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PSKH2Q96QS6 385 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 NUDCD1Q96RS6 583 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 NDC1Q9BTX1 674 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 RIOK2Q9BVS4 552 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 AP1M1Q9BXS5 423 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 MRM3Q9HC36 420 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 HAUS2Q9NVX0 235 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 HRASLS2Q9NWW9 162 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 IFT80Q9P2H3 777 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ST6GALNAC2Q9UJ37 374 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 MRPS2Q9Y399 296 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 ASB1Q9Y576 335 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 PCYT1BQ9Y5K3 369 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 AP1M2Q9Y6Q5 423 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 TNRC6AQ8NDV7 1962 aaKnown RBP3.94□□□□□ -1.78
SNHG1-220ENST00000544550 CHD5Q8TDI0 1954 aa3.94□□□□□ -1.78
SNHG1-220ENST00000544550 CENPEQ02224 2701 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CELSR1Q9NYQ6 3014 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 UNC13CQ8NB66 2214 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 A0A1B0GVL5 298 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CCDC78A2IDD5 438 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 C2CD4BA6NLJ0 364 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 OR52A4PA6NMU1 304 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 BECN2A8MW95 431 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 EIF3CLB5ME19 914 aaKnown RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 E9PLN8 166 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 DFFAO00273 331 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PRRG2O14669 202 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PSMA7O14818 248 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CHUKO15111 745 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF749O43361 778 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 USP1O94782 785 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 SLC25A14O95258 325 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PIM1P11309 404 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 UNGP13051 313 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CYP11B1P15538 503 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF7P17097 686 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF8P17098 575 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CDH3P22223 829 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CA4P22748 312 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 MMP11P24347 488 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 THBS2P35442 1172 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PRCPP42785 496 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TNFSF10P50591 281 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 STC1P52823 247 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 DGKQP52824 942 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TPI1P60174 286 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PPP1CAP62136 330 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CACNG1Q06432 222 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 DMPKQ09013 629 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 MYBPHQ13203 477 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 GTF2H3Q13889 308 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PDCD1Q15116 288 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 C3AR1Q16581 482 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 C15orf59Q2T9L4 293 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TUBB8Q3ZCM7 444 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CCDC14Q49A88 953 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 KRTCAP3Q53RY4 240 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF569Q5MCW4 686 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 HENMT1Q5T8I9 393 aaKnown RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ZNF658Q5TYW1 1059 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PRAMEF17Q5VTA0 474 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CD276Q5ZPR3 534 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PDPK2PQ6A1A2 396 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TRNP1Q6NT89 227 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 RHBDD2Q6NTF9 364 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TRIM65Q6PJ69 517 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CERS6Q6ZMG9 384 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 LINC00696Q6ZRV3 163 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 Q71RC1 249 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CILP2Q8IUL8 1156 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CMIPQ8IY22 773 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CCDC185Q8N715 623 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 DNAAF3Q8N9W5 541 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ACRBPQ8NEB7 543 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CATSPER1Q8NEC5 780 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 MYRIPQ8NFW9 859 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 OR1L3Q8NH93 324 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CCDC110Q8TBZ0 833 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CCHCR1Q8TD31 782 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 DENND1AQ8TEH3 1009 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 FAM172AQ8WUF8 416 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 PIH1D2Q8WWB5 315 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 ASB5Q8WWX0 329 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 RXFP2Q8WXD0 754 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 FAM168AQ92567 244 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CENPIQ92674 756 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 N4BP2L2Q92802 583 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 HAS2Q92819 552 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 SDCCAG3Q96C92 435 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 MBD6Q96DN6 1003 aa3.93□□□□□ -1.78
SNHG1-220ENST00000544550 RMND5BQ96G75 393 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 DHTKD1Q96HY7 919 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 THOC3Q96J01 351 aaKnown RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 CELF6Q96J87 481 aaKnown RBP3.93□□□□□ -1.78
SNHG1-220ENST00000544550 TAAR6Q96RI8 345 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms