RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 SF1Q15637 639 aaKnown RBP18.41■□□□□ 0.54
DDX55-211ENST00000544429 GPR19Q15760 415 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 TMTC4Q5T4D3 741 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 FCRL6Q6DN72 434 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 MBOAT1Q6ZNC8 495 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 ZFAND4Q86XD8 727 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 PPP1R3BQ86XI6 285 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 DNAJC22Q8N4W6 341 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 ISL2Q96A47 359 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 ZUFSPQ96AP4 578 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 KLHL25Q9H0H3 589 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 SOHLH2Q9NX45 425 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 ZNF180Q9UJW8 692 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 SEC16AO15027 2179 aa18.41■□□□□ 0.54
DDX55-211ENST00000544429 DSPP15924 2871 aaKnown RBP18.4■□□□□ 0.54
DDX55-211ENST00000544429 MDC1Q14676 2089 aaKnown RBP18.4■□□□□ 0.54
DDX55-211ENST00000544429 TARM1B6A8C7 271 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 STMND1H3BQB6 276 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 ZNF28P17035 718 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 GCAP28676 217 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 SLC26A3P40879 764 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 GRIA3P42263 894 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 MAGEA12P43365 314 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 ARL4DP49703 201 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 YBX1P67809 324 aaKnown RBP18.4■□□□□ 0.54
DDX55-211ENST00000544429 CDKL1Q00532 357 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 PWWP2BQ6NUJ5 590 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 SUSD1Q6UWL2 747 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 CMC1Q7Z7K0 106 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 SPACA3Q8IXA5 215 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 PPFIBP2Q8ND30 876 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 DCAKDQ8WVC6 231 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 PAFAH2Q99487 392 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 SGPP1Q9BX95 441 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 RARRES3Q9UL19 164 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 LOC400499M0QZD8 3231 aa18.4■□□□□ 0.54
DDX55-211ENST00000544429 FER1L5A0AVI2 2057 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 IGKV1-8A0A0C4DH67 115 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 STK17BO94768 372 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 SYF2O95926 243 aaKnown RBP18.39■□□□□ 0.53
DDX55-211ENST00000544429 ALDOAP04075 364 aaKnown RBP18.39■□□□□ 0.53
DDX55-211ENST00000544429 CCDC166P0CW27 439 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 CD1DP15813 335 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 CRABP2P29373 138 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 TLE3Q04726 772 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 PRDX1Q06830 199 aaKnown RBP18.39■□□□□ 0.53
DDX55-211ENST00000544429 MAP7Q14244 749 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 TSNQ15631 228 aaKnown RBP18.39■□□□□ 0.53
DDX55-211ENST00000544429 MROH9Q5TGP6 573 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 FIGLAQ6QHK4 219 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 AGTRAPQ6RW13 159 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 TIPARPQ7Z3E1 657 aaKnown RBP18.39■□□□□ 0.53
DDX55-211ENST00000544429 CCDC91Q7Z6B0 441 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 ADAMTSL2Q86TH1 951 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 SYTL1Q8IYJ3 562 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 OR56A3Q8NH54 315 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 OR1L3Q8NH93 324 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 KCNE4Q8WWG9 221 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 FBXL8Q96CD0 374 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 MIPEPQ99797 713 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 SLC6A20Q9NP91 592 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 INTS7Q9NVH2 962 aaKnown RBP18.39■□□□□ 0.53
DDX55-211ENST00000544429 FETUBQ9UGM5 382 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 KLHL20Q9Y2M5 609 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 OARD1Q9Y530 152 aa18.39■□□□□ 0.53
DDX55-211ENST00000544429 OR2A25A4D2G3 310 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 NPEPPSL1A6NEC2 478 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 RRP8O43159 456 aaKnown RBP18.38■□□□□ 0.53
DDX55-211ENST00000544429 GMPRP36959 345 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 TBPL1P62380 186 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 VSNL1P62760 191 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 DLG1Q12959 904 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 BMPR2Q13873 1038 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 SLC29A2Q14542 456 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 TGIF1Q15583 401 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 ICE2Q659A1 982 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 ZNF425Q6IV72 752 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 WDR93Q6P2C0 686 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 NKD1Q969G9 470 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 PTERQ96BW5 349 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 MRRFQ96E11 262 aaKnown RBP18.38■□□□□ 0.53
DDX55-211ENST00000544429 ZNF285Q96NJ3 590 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 ARL15Q9NXU5 204 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 ANKMY1Q9P2S6 941 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 PCDHB3Q9Y5E6 796 aa18.38■□□□□ 0.53
DDX55-211ENST00000544429 MAP3K7O43318 606 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 CTSVO60911 334 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 C2P06681 752 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 INHBAP08476 426 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 HIST1H2AGP0C0S8 130 aaPredicted RBP18.37■□□□□ 0.53
DDX55-211ENST00000544429 HIST1H2ADP20671 130 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 RPA3P35244 121 aaPredicted RBP18.37■□□□□ 0.53
DDX55-211ENST00000544429 GCGRP47871 477 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 SERPINB9P50453 376 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 ATP6V0D1P61421 351 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 ABATP80404 500 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 RELAQ04206 551 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 NAA25Q14CX7 972 aa18.37■□□□□ 0.53
DDX55-211ENST00000544429 CENPLQ8N0S6 344 aaPredicted RBP18.37■□□□□ 0.53
DDX55-211ENST00000544429 SPATA6LQ8N4H0 392 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms