RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 OR2L3Q8NG85 312 aa22.35■■□□□ 1.17
CHFR-222ENST00000544093 OR2A1Q8NGT9 310 aa22.35■■□□□ 1.17
CHFR-222ENST00000544093 SLC30A3Q99726 388 aa22.35■■□□□ 1.17
CHFR-222ENST00000544093 SPRTNQ9H040 489 aaPredicted RBP22.35■■□□□ 1.17
CHFR-222ENST00000544093 UTP6Q9NYH9 597 aaKnown RBP22.35■■□□□ 1.17
CHFR-222ENST00000544093 ANKMY1Q9P2S6 941 aa22.35■■□□□ 1.17
CHFR-222ENST00000544093 MAN2B2Q9Y2E5 1009 aa22.35■■□□□ 1.17
CHFR-222ENST00000544093 HEMK1Q9Y5R4 338 aaPredicted RBP22.35■■□□□ 1.17
CHFR-222ENST00000544093 GCN1Q92616 2671 aaKnown RBP22.34■■□□□ 1.17
CHFR-222ENST00000544093 BAHCC1Q9P281 2608 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 GFYI3L273 518 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 HCRTR1O43613 425 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 SRPX2O60687 465 aaPredicted RBP22.34■■□□□ 1.17
CHFR-222ENST00000544093 CCNDBP1O95273 360 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 CMPK1P30085 196 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 GRIA3P42263 894 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 CARSP49589 748 aaKnown RBP22.34■■□□□ 1.17
CHFR-222ENST00000544093 DCDP81605 110 aaKnown RBP22.34■■□□□ 1.17
CHFR-222ENST00000544093 CBLBQ13191 982 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 ZNF385CQ66K41 422 aaPredicted RBP22.34■■□□□ 1.17
CHFR-222ENST00000544093 STEAP4Q687X5 459 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 FCRL6Q6DN72 434 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 FAM198BQ6UWH4 519 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 IGDCC3Q8IVU1 814 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 FAM20CQ8IXL6 584 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 ZNF655Q8N720 491 aaPredicted RBP22.34■■□□□ 1.17
CHFR-222ENST00000544093 SPATA4Q8NEY3 305 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 TRIM31Q9BZY9 425 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 TCFL5Q9UL49 500 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 CHMP2BQ9UQN3 213 aa22.34■■□□□ 1.17
CHFR-222ENST00000544093 HELZ2Q9BYK8 2649 aaKnown RBP22.34■■□□□ 1.17
CHFR-222ENST00000544093 A0A1W2PPV9 198 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 FURINP09958 794 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 RPA3P35244 121 aaPredicted RBP22.33■■□□□ 1.17
CHFR-222ENST00000544093 PMS2P54278 862 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 PNLIPRP1P54315 467 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 CALCOCO2Q13137 446 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 GRM7Q14831 915 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 PTCHD3Q3KNS1 767 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 APLFQ8IW19 511 aaPredicted RBP22.33■■□□□ 1.17
CHFR-222ENST00000544093 CPNE9Q8IYJ1 553 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 C9orf43Q8TAL5 461 aaPredicted RBP22.33■■□□□ 1.17
CHFR-222ENST00000544093 CFAP36Q96G28 342 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 GBP5Q96PP8 586 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 RUFY1Q96T51 708 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 PKP4Q99569 1192 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 MIPEPQ99797 713 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 SELENOSQ9BQE4 189 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 GPN3Q9UHW5 284 aaPredicted RBP22.33■■□□□ 1.17
CHFR-222ENST00000544093 KLHL20Q9Y2M5 609 aa22.33■■□□□ 1.17
CHFR-222ENST00000544093 MKRN2OSH3BPM6 223 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 RFPL1O75677 317 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 AHSGP02765 367 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 C8GP07360 202 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 CAPN1P07384 714 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 F7P08709 466 aaPredicted RBP22.32■■□□□ 1.16
CHFR-222ENST00000544093 RPL21P46778 160 aaKnown RBP22.32■■□□□ 1.16
CHFR-222ENST00000544093 RPS18P62269 152 aaKnown RBP22.32■■□□□ 1.16
CHFR-222ENST00000544093 ILF2Q12905 390 aaKnown RBP22.32■■□□□ 1.16
CHFR-222ENST00000544093 SP140Q13342 867 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 FAM214AQ32MH5 1076 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 TEDDM1Q5T9Z0 273 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 CYHR1Q6ZMK1 362 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 PALM2Q8IXS6 379 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 TTC29Q8NA56 475 aaPredicted RBP22.32■■□□□ 1.16
CHFR-222ENST00000544093 ZNF285Q96NJ3 590 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 NDNQ99608 321 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 ERP44Q9BS26 406 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 WHRNQ9P202 907 aa22.32■■□□□ 1.16
CHFR-222ENST00000544093 FER1L5A0AVI2 2057 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 E7ESA3 106 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 TP73O15350 636 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 SLC16A8O95907 504 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 PIM1P11309 404 aaPredicted RBP22.31■■□□□ 1.16
CHFR-222ENST00000544093 MCM3P25205 808 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 PSMB5P28074 263 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 ABATP80404 500 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 PDIA2Q13087 525 aaKnown RBP22.31■■□□□ 1.16
CHFR-222ENST00000544093 IL10RAQ13651 578 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 FASTKQ14296 549 aaKnown RBP22.31■■□□□ 1.16
CHFR-222ENST00000544093 LCN10Q6JVE6 187 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 UBE2R2Q712K3 238 aaPredicted RBP22.31■■□□□ 1.16
CHFR-222ENST00000544093 MYO1HQ8N1T3 1032 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 MCOLN3Q8TDD5 553 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 IP6K3Q96PC2 410 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 MRPS30Q9NP92 439 aaKnown RBP22.31■■□□□ 1.16
CHFR-222ENST00000544093 ZFATQ9P243 1243 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 IFT80Q9P2H3 777 aaPredicted RBP22.31■■□□□ 1.16
CHFR-222ENST00000544093 NDOR1Q9UHB4 597 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 SNX24Q9Y343 169 aa22.31■■□□□ 1.16
CHFR-222ENST00000544093 A0A1B0GX78 115 aa22.3■■□□□ 1.16
CHFR-222ENST00000544093 FITM1A5D6W6 292 aa22.3■■□□□ 1.16
CHFR-222ENST00000544093 KRT87PA6NCN2 255 aa22.3■■□□□ 1.16
CHFR-222ENST00000544093 SLC16A5O15375 505 aa22.3■■□□□ 1.16
CHFR-222ENST00000544093 SYF2O95926 243 aaKnown RBP22.3■■□□□ 1.16
CHFR-222ENST00000544093 PLA2G2AP14555 144 aa22.3■■□□□ 1.16
CHFR-222ENST00000544093 GABRB3P28472 473 aa22.3■■□□□ 1.16
CHFR-222ENST00000544093 PRDX1Q06830 199 aaKnown RBP22.3■■□□□ 1.16
CHFR-222ENST00000544093 NKAIN1Q4KMZ8 207 aa22.3■■□□□ 1.16
CHFR-222ENST00000544093 HP1BP3Q5SSJ5 553 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms