RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 USP22Q9UPT9 525 aa16.56■□□□□ 0.24
PTPRO-209ENST00000543886 TCRBV5S2A0A599 114 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 H0YJX3 145 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 VEGFDO43915 354 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 GMNNO75496 209 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 UMPSP11172 480 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 FCGR1AP12314 374 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 ZNF26P17031 533 aaPredicted RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 AMD1P17707 334 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 PSMC3P17980 439 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 SDC1P18827 310 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 CD22P20273 847 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 FASP25445 335 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 EIF2DP41214 584 aaKnown RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 GRIA2P42262 883 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 NRF1Q16656 503 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 DNAJC14Q6Y2X3 702 aaPredicted RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 NUDT18Q6ZVK8 323 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 TRMT11Q7Z4G4 463 aaKnown RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 MARVELD2Q8N4S9 558 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 FBXO15Q8NCQ5 510 aaPredicted RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 DNAJB8Q8NHS0 232 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 HIC2Q96JB3 615 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 NSMCE2Q96MF7 247 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 SH3GL1Q99961 368 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 THUMPD3Q9BV44 507 aaKnown RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 RMND5AQ9H871 391 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 FADS3Q9Y5Q0 445 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 NPC1O15118 1278 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 TPST1O60507 370 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 APODP05090 189 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 ZNF8P17098 575 aaPredicted RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 HRH2P25021 359 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 CHN2P52757 468 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 PLOD1Q02809 727 aaPredicted RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 CYP4F3Q08477 520 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 DDX39BQ13838 428 aaKnown RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 C6orf52Q5T4I8 152 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 GLYATQ6IB77 296 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 AADATQ8N5Z0 425 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 TRPV3Q8NET8 790 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 LINC00615Q96LM1 132 aaPredicted RBP16.55■□□□□ 0.24
PTPRO-209ENST00000543886 OR4K3Q96R72 315 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 AGPAT4Q9NRZ5 378 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 GPR34Q9UPC5 381 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 NEUROG3Q9Y4Z2 214 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 AK5Q9Y6K8 562 aa16.55■□□□□ 0.24
PTPRO-209ENST00000543886 TRANK1O15050 2925 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 C17orf113A0A1B0GUU1 675 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 H0YIV9 168 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 LINC01565O15544 149 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 POP7O75817 140 aaKnown RBP16.54■□□□□ 0.24
PTPRO-209ENST00000543886 PGS1Q32NB8 556 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 PIP5KL1Q5T9C9 394 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 OR52E8Q6IFG1 317 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 CAPN13Q6MZZ7 669 aaPredicted RBP16.54■□□□□ 0.24
PTPRO-209ENST00000543886 NOXRED1Q6NXP6 359 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 ANKRD54Q6NXT1 300 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 SYCE2Q6PIF2 218 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 SYTL1Q8IYJ3 562 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 ST13P4Q8IZP2 240 aaPredicted RBP16.54■□□□□ 0.24
PTPRO-209ENST00000543886 RNF175Q8N4F7 328 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 TNIP2Q8NFZ5 429 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 WDR20Q8TBZ3 569 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 HM13Q8TCT9 377 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 CNBD2Q96M20 576 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 MTERF1Q99551 399 aaKnown RBP16.54■□□□□ 0.24
PTPRO-209ENST00000543886 SGK2Q9HBY8 427 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 GPRC5BQ9NZH0 403 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 VPS29Q9UBQ0 182 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 HCN2Q9UL51 889 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 AP3M1Q9Y2T2 418 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 KCNE2Q9Y6J6 123 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 STON1Q9Y6Q2 735 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 ANTXRLA6NF34 631 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 TACR1P25103 407 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 GDI1P31150 447 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 MAP7Q14244 749 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 UGT2A3Q6UWM9 527 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 ZBTB49Q6ZSB9 765 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 CACUL1Q86Y37 369 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 ZNF547Q8IVP9 402 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 OR2T12Q8NG77 320 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 TESCQ96BS2 214 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 MRPL38Q96DV4 380 aaKnown RBP16.54■□□□□ 0.24
PTPRO-209ENST00000543886 ITCHQ96J02 903 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 ZNF597Q96LX8 424 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 TRAPPC9Q96Q05 1148 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 MYADMQ96S97 322 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 EBPLQ9BY08 206 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 RPF2Q9H7B2 306 aaKnown RBP16.54■□□□□ 0.24
PTPRO-209ENST00000543886 SLC28A3Q9HAS3 691 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 PCDHGA11Q9Y5H2 935 aa16.54■□□□□ 0.24
PTPRO-209ENST00000543886 GSTA4O15217 222 aa16.53■□□□□ 0.24
PTPRO-209ENST00000543886 ERN1O75460 977 aaKnown RBP16.53■□□□□ 0.24
PTPRO-209ENST00000543886 LRATO95237 230 aa16.53■□□□□ 0.24
PTPRO-209ENST00000543886 PIM1P11309 404 aaPredicted RBP16.53■□□□□ 0.24
PTPRO-209ENST00000543886 HSD3B1P14060 373 aa16.53■□□□□ 0.24
PTPRO-209ENST00000543886 HSD3B2P26439 372 aa16.53■□□□□ 0.24
PTPRO-209ENST00000543886 WASP42768 502 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms