RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 SEMA3AQ14563 771 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 SP5Q6BEB4 398 aaPredicted RBP21.62■■□□□ 1.05
CDKN3-207ENST00000543789 RPUSD3Q6P087 351 aaKnown RBP21.62■■□□□ 1.05
CDKN3-207ENST00000543789 NLRP9Q7RTR0 991 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 PEX26Q7Z412 305 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 DTWD1Q8N5C7 304 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 BCORP1Q8N888 145 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 MARVELD3Q96A59 401 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 RAD51AP1Q96B01 352 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 ZNF778Q96MU6 729 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 SLX1AQ9BQ83 275 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 ETNK1Q9HBU6 452 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 ZNF304Q9HCX3 659 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 ANAPC5Q9UJX4 755 aa21.62■■□□□ 1.05
CDKN3-207ENST00000543789 REXO2Q9Y3B8 237 aaKnown RBP21.62■■□□□ 1.05
CDKN3-207ENST00000543789 ARHGAP10A1A4S6 786 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 ZG16O60844 167 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 CTSVO60911 334 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 SUN1O94901 812 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 ACPPP15309 386 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 KLC1Q07866 573 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 TMED2Q15363 201 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 AARS2Q5JTZ9 985 aaKnown RBP21.61■■□□□ 1.05
CDKN3-207ENST00000543789 PRMT9Q6P2P2 845 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 KRT222Q8N1A0 295 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 RAB42Q8N4Z0 105 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 OR1N1Q8NGS0 311 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 GSDMBQ8TAX9 411 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 STT3BQ8TCJ2 826 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 MIEF2Q96C03 454 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 MRFAP1L1Q96HT8 127 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 PANX2Q96RD6 677 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 ZNF160Q9HCG1 818 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 OLAHQ9NV23 265 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 ZNF282Q9UDV7 671 aaPredicted RBP21.61■■□□□ 1.05
CDKN3-207ENST00000543789 ZC3H7BQ9UGR2 993 aaKnown RBP21.61■■□□□ 1.05
CDKN3-207ENST00000543789 KLK4Q9Y5K2 254 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 FAM169AQ9Y6X4 670 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 CCDC88CQ9P219 2028 aa21.61■■□□□ 1.05
CDKN3-207ENST00000543789 TCRBV7S2A1N4TA0A589 114 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 PRMT5O14744 637 aaPredicted RBP21.6■■□□□ 1.05
CDKN3-207ENST00000543789 JRKO75564 520 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 ZGLP1P0C6A0 271 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 FDFT1P37268 417 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 GRIA1P42261 906 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 ATG9BQ674R7 924 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 LDB1Q86U70 411 aaPredicted RBP21.6■■□□□ 1.05
CDKN3-207ENST00000543789 FJX1Q86VR8 437 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 KBTBD2Q8IY47 623 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 MESP1Q9BRJ9 268 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 C3orf18Q9UK00 162 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 TTC7AQ9ULT0 858 aaPredicted RBP21.6■■□□□ 1.05
CDKN3-207ENST00000543789 PACSIN2Q9UNF0 486 aaPredicted RBP21.6■■□□□ 1.05
CDKN3-207ENST00000543789 TCAF1Q9Y4C2 921 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 MRFAP1Q9Y605 127 aa21.6■■□□□ 1.05
CDKN3-207ENST00000543789 A0A0J9YVX5 310 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 MIF4GDA9UHW6 222 aaKnown RBP21.59■■□□□ 1.05
CDKN3-207ENST00000543789 E7EVH7 732 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 MAP2K7O14733 419 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 MED26O95402 600 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 C1orf105O95561 183 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 ARG2P78540 354 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 PTRHD1Q6GMV3 140 aaKnown RBP21.59■■□□□ 1.05
CDKN3-207ENST00000543789 FRMPD2BQ6IN97 320 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 PRSS58Q8IYP2 241 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 PEX13Q92968 403 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 MIPEPQ99797 713 aa21.59■■□□□ 1.05
CDKN3-207ENST00000543789 LOC105369274A0A096LPK9 316 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 LOC102723532A0A0G2JNH3 316 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 DYTNA2CJ06 578 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 USP1O94782 785 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 EIF2S1P05198 315 aaKnown RBP21.58■■□□□ 1.05
CDKN3-207ENST00000543789 PRF1P14222 555 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 TTPAP49638 278 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 NAA30Q147X3 362 aaPredicted RBP21.58■■□□□ 1.05
CDKN3-207ENST00000543789 NDUFAF7Q7L592 441 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 SYCE1Q8N0S2 351 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 OR4N4Q8N0Y3 316 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 OR2L3Q8NG85 312 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 HMGCLL1Q8TB92 370 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 SKA2Q8WVK7 121 aaPredicted RBP21.58■■□□□ 1.05
CDKN3-207ENST00000543789 C8orf44Q96CB5 159 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 MAGEB10Q96LZ2 347 aaPredicted RBP21.58■■□□□ 1.05
CDKN3-207ENST00000543789 PANX3Q96QZ0 392 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 TRIM56Q9BRZ2 755 aaKnown RBP21.58■■□□□ 1.05
CDKN3-207ENST00000543789 CATSPERZQ9NTU4 200 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 ANKRD12Q6UB98 2062 aa21.58■■□□□ 1.05
CDKN3-207ENST00000543789 NSG1A0A0A6YYJ2 146 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 PRSS44E7EML9 344 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 KPNA5O15131 536 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 IFNB1P01574 187 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 ELAVL4P26378 380 aaKnown RBP21.57■■□□□ 1.04
CDKN3-207ENST00000543789 PSMB5P28074 263 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 MUM1Q2TAK8 710 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 VWA2Q5GFL6 755 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 ZNF324BQ6AW86 544 aaPredicted RBP21.57■■□□□ 1.04
CDKN3-207ENST00000543789 RAD9BQ6WBX8 426 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 ACRBPQ8NEB7 543 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 OR2A1Q8NGT9 310 aa21.57■■□□□ 1.04
CDKN3-207ENST00000543789 ATG4AQ8WYN0 398 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms