RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 TMEM179BQ7Z7N9 219 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 DCP2Q8IU60 420 aaKnown RBP13.11□□□□□ -0.31
PPME1-208ENST00000543525 MCOLN3Q8TDD5 553 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 CSGALNACT1Q8TDX6 532 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 TBC1D20Q96BZ9 403 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 MCCC1Q96RQ3 725 aaPredicted RBP13.11□□□□□ -0.31
PPME1-208ENST00000543525 CPEB1Q9BZB8 566 aaKnown RBP13.11□□□□□ -0.31
PPME1-208ENST00000543525 INTS6Q9UL03 887 aaKnown RBP13.11□□□□□ -0.31
PPME1-208ENST00000543525 PPT2Q9UMR5 302 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 A0A1W2PQ67 120 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 BNIP3LO60238 219 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 PRMT3O60678 531 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 UGT2B11O75310 529 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 AMD1P17707 334 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 CD247P20963 164 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 PTPN6P29350 595 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 MAGEA2P43356 314 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 KIR3DL1P43629 444 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 ARHGDIAP52565 204 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 AP1S2P56377 157 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 C21orf59P57076 290 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 ABRQ12979 859 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 BNIP3Q12983 259 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 SPIDRQ14159 915 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 DUOXA1Q1HG43 343 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 DPY19L1Q2PZI1 675 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 CTU2Q2VPK5 515 aaKnown RBP13.11□□□□□ -0.31
PPME1-208ENST00000543525 PTCHD3Q3KNS1 767 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 FRG2Q64ET8 278 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 DOK6Q6PKX4 331 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 ANKRD46Q86W74 232 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 ZDHHC21Q8IVQ6 265 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 SETD9Q8NE22 299 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 BPIFB6Q8NFQ5 453 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 MUL1Q969V5 352 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 APIPQ96GX9 242 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 APOLD1Q96LR9 279 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 ZNF641Q96N77 438 aaPredicted RBP13.11□□□□□ -0.31
PPME1-208ENST00000543525 FRG2BQ96QU4 278 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 EMILIN2Q9BXX0 1053 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 GABARAPL1Q9H0R8 117 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 GPRC5BQ9NZH0 403 aa13.11□□□□□ -0.31
PPME1-208ENST00000543525 TRAV19A0A0A6YYK7 116 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 BCKDKO14874 412 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 LRATO95237 230 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 POP4O95707 220 aaKnown RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 C1SP09871 688 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 CCDC159P0C7I6 412 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 ATP1B2P14415 290 aaPredicted RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 JUPP14923 745 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 PRPS1L1P21108 318 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 PRKACGP22612 351 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 TACR1P25103 407 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 HALP42357 657 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 CDKN2CP42773 168 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 CTSOP43234 321 aaPredicted RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 SPINT3P49223 89 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 STK19P49842 368 aaPredicted RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 PLA2G16P53816 162 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 ISL1P61371 349 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 SRSF11Q05519 484 aaKnown RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 ZNF33BQ06732 778 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 CARD16Q5EG05 197 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 ANKRD34AQ69YU3 496 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 GTF2IRD2BQ6EKJ0 949 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 NOXRED1Q6NXP6 359 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 NEK5Q6P3R8 708 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 ERICH5Q6P6B1 374 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 NEK10Q6ZWH5 1172 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 DET1Q7L5Y6 550 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 DDX53Q86TM3 631 aaKnown RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 SERPINA11Q86U17 422 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 GTF2IRD2Q86UP8 949 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 ZC3H7AQ8IWR0 971 aaKnown RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 FRS2Q8WU20 508 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 FCRL1Q96LA6 429 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 HHIPQ96QV1 700 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 NODALQ96S42 347 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 ABCG8Q9H221 673 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 ZDHHC6Q9H6R6 413 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 TM9SF3Q9HD45 589 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 FAIMQ9NVQ4 179 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 THG1LQ9NWX6 298 aaKnown RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 RHBDL2Q9NX52 303 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 WARS2Q9UGM6 360 aaKnown RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 TMEFF2Q9UIK5 374 aaPredicted RBP13.1□□□□□ -0.31
PPME1-208ENST00000543525 SLC25A13Q9UJS0 675 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 RPS6KA6Q9UK32 745 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 HS3ST2Q9Y278 367 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 DNAH12Q6ZR08 3092 aa13.1□□□□□ -0.31
PPME1-208ENST00000543525 SCN5AQ14524 2016 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 CFAP99D6REC4 459 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 GFYI3L273 518 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 SLC1A7O00341 560 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 FPGTO14772 594 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 FOXD2O60548 495 aaPredicted RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 ZNF682O95780 498 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 INHBBP09529 407 aa13.09□□□□□ -0.31
PPME1-208ENST00000543525 ZNF182P17025 639 aaPredicted RBP13.09□□□□□ -0.31
PPME1-208ENST00000543525 PFKLP17858 780 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms