RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 ANKRD36A6QL64 1941 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TCRBV7S3A2A0A539 114 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 HEATR9A2RTY3 570 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 KIAA1324LA8MWY0 1029 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 GOLGA8MH3BSY2 632 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 DNALI1O14645 258 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 RAD51CO43502 376 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CER1O95813 267 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 NR2F1P10589 423 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SPINK2P20155 84 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ADRA1DP25100 572 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SPAM1P38567 509 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CD96P40200 585 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MSH2P43246 934 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MAGEA6P43360 314 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 NXPH1P58417 271 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 DCDC1P59894 354 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PFN3P60673 137 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 RPS16P62249 146 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 NKX6-1P78426 367 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MRPS25P82663 173 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 GRIK2Q13002 908 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CALCOCO2Q13137 446 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MSLNQ13421 630 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 IKZF1Q13422 519 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TRIM25Q14258 630 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SF3A2Q15428 464 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SKIDA1Q1XH10 827 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 KIF19Q2TAC6 998 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ANKDD1AQ495B1 522 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 FLYWCH1Q4VC44 716 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PCID2Q5JVF3 399 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CERCAMQ5T4B2 595 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 RNASEH2BQ5TBB1 312 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ANKRD22Q5VYY1 191 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 C8orf74Q6P047 294 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MTFR2Q6P444 385 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 NLRP9Q7RTR0 991 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 HOOK3Q86VS8 718 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 DTX1Q86Y01 620 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TRAM1L1Q8N609 369 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ZBTB8BQ8NAP8 495 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 GPR26Q8NDV2 337 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MCUQ8NE86 351 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 OR4K2Q8NGD2 314 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SCAMP4Q969E2 229 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 RAB24Q969Q5 203 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 RNF125Q96EQ8 232 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SNF8Q96H20 258 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PLEKHG4BQ96PX9 1271 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ALPK1Q96QP1 1244 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ERP44Q9BS26 406 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ZSCAN5AQ9BUG6 496 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 IL22Q9GZX6 179 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 RAB17Q9H0T7 212 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 POFUT1Q9H488 388 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 GDF3Q9NR23 364 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PHPT1Q9NRX4 125 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 IL17CQ9P0M4 197 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 LAMP5Q9UJQ1 280 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ANAPC5Q9UJX4 755 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 OR1A2Q9Y585 309 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 KCTD3Q9Y597 815 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MAP1BP46821 2468 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 GLYATL1P3A0A0U1RQE8 302 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ARHGAP10A1A4S6 786 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CCDC78A2IDD5 438 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 SDR42E2A6NKP2 422 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 H3BUI4 141 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 K7ESM1 405 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 INPP4BO15327 924 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 LDB2O43679 373 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 DFNA5O60443 496 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 AVILO75366 819 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ITGA5P08648 1049 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 HOXC4P09017 264 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MLNP12872 115 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 IFNGR1P15260 489 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ENGP17813 658 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 KELP23276 732 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CD40P25942 277 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MGAT1P26572 445 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TEAD1P28347 426 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TRIM23P36406 574 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CTSKP43235 329 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 KCNC1P48547 511 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ARRB1P49407 418 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ALDH3A2P51648 485 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ZNF140P52738 457 aaPredicted RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 KIAA1024LP59773 190 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 CDK3Q00526 305 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MRPL28Q13084 256 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 ITGA9Q13797 1035 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PTPRCAPQ14761 206 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 NFATC4Q14934 902 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 MORF4L2Q15014 288 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 TESK1Q15569 626 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 HLA-BQ31612 363 aa5.01□□□□□ -1.61
CLIP1-217ENST00000543205 HENMT1Q5T8I9 393 aaKnown RBP5.01□□□□□ -1.61
CLIP1-217ENST00000543205 PDPK2PQ6A1A2 396 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms