RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ADHFE1Q8IWW8 467 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 C10orf111Q8N326 155 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PGBD3Q8N328 593 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CLDN19Q8N6F1 224 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 KRTCAP2Q8N6L1 136 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 DCAF4L2Q8NA75 395 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 TTC16Q8NEE8 873 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF555Q8NEP9 628 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 FBXO30Q8TB52 745 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 MIPOL1Q8TD10 442 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 RHBDD1Q8TEB9 315 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GIPC3Q8TF64 312 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CHPT1Q8WUD6 406 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 SGCDQ92629 289 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 TESCQ96BS2 214 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 SDCCAG3Q96C92 435 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 NRBF2Q96F24 287 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 COX4I2Q96KJ9 171 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 FCRL1Q96LA6 429 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 LYSMD1Q96S90 227 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 BCL7BQ9BQE9 202 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 TSEN34Q9BSV6 310 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 HTATIP2Q9BUP3 242 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 THUMPD3Q9BV44 507 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ACPTQ9BZG2 426 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 NACA2Q9H009 215 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 TRIT1Q9H3H1 467 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ASB8Q9H765 288 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ZFYVE1Q9HBF4 777 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 IRAK4Q9NWZ3 460 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 C1orf109Q9NX04 203 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 RHBDL2Q9NX52 303 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 WWOXQ9NZC7 414 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 TRPM5Q9NZQ8 1165 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM8A1Q9UBU6 413 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 KLQ9UEF7 1012 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 AFF4Q9UHB7 1163 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 EVLQ9UI08 416 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF490Q9ULM2 529 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PDE10AQ9Y233 779 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 FNDC3AQ9Y2H6 1198 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 MKI67P46013 3256 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 COL4A6Q14031 1691 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ANAPC1Q9H1A4 1944 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GLYATL1P3A0A0U1RQE8 302 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 LOC100130705A0A1B0GUX0 176 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 C2orf78A6NCI8 922 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 NT5C1B-RDH14C9J2C7 533 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 K7ERQ8 282 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC1A7O00341 560 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 FFAR3O14843 346 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GPR42O15529 346 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 NOBOXO60393 691 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 TBL1XO60907 577 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 BCAS1O75363 584 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 SEC22BO75396 215 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF821O75541 412 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 STK16O75716 305 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 SULT1C4O75897 302 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CLPXO76031 633 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 RECQL5O94762 991 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CLDN9O95484 217 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GUCA1CO95843 209 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 BCL10O95999 233 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 KRT6AP02538 564 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 KRT6BP04259 564 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 SEMG1P04279 462 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 UGT2B4P06133 528 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PRPS2P11908 318 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 IMPDH2P12268 514 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ELNP15502 786 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 EPB42P16452 691 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ITGB6P18564 788 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 EEF1B2P24534 225 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 MAP4P27816 1152 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 OR1D2P34982 312 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 HNF1BP35680 557 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ARL1P40616 181 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CSKP41240 450 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PPP3CCP48454 512 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 KRT6CP48668 564 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GP2P55259 537 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 RPS14P62263 151 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PHEXP78562 749 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PLIN5Q00G26 463 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GSTM4Q03013 218 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ABHD18Q0P651 414 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 MTAPQ13126 283 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 AQP6Q13520 282 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 LAPTM5Q13571 262 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GBX1Q14549 363 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ACOX1Q15067 660 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CHRNA6Q15825 494 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CTF1Q16619 201 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 MEP1AQ16819 746 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 TCTN1Q2MV58 587 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ZXDCQ2QGD7 858 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GTDC1Q4AE62 458 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CPZQ66K79 652 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms