RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 GPR34Q9UPC5 381 aa16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 EIF3LQ9Y262 564 aaKnown RBP16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 AK5Q9Y6K8 562 aa16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 AP1G1O43747 822 aa16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 NPPBP16860 134 aa16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 TRIP10Q15642 601 aa16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 DNAJC14Q6Y2X3 702 aaPredicted RBP16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 AMZ2Q86W34 360 aa16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 TP53I13Q8NBR0 393 aaPredicted RBP16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 WDR20Q8TBZ3 569 aa16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 MCM8Q9UJA3 840 aa16.72■□□□□ 0.27
TMEM50B-210ENST00000542230 GRXCR2A6NFK2 248 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 SLC31A1O15431 190 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 HOXB2P14652 356 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 NCK1P16333 377 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 MTPNP58546 118 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 PPP2CBP62714 309 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 PPP2CAP67775 309 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 TAP2Q03519 686 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 SFT2D3Q587I9 215 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 TTC23LQ6PF05 361 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 HM13Q8TCT9 377 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 GABRG3Q99928 467 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 PKP2Q99959 881 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 SPNS1Q9H2V7 528 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 GID8Q9NWU2 228 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 ASF1AQ9Y294 204 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 CA5BQ9Y2D0 317 aa16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 TDRKHQ9Y2W6 561 aaKnown RBP16.71■□□□□ 0.27
TMEM50B-210ENST00000542230 C1QCP02747 245 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 MTHFD1P11586 935 aaKnown RBP16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 SDC1P18827 310 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 RNF165Q6ZSG1 346 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 CHST15Q7LFX5 561 aaPredicted RBP16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 TMPRSS11BQ86T26 416 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 LRRC56Q8IYG6 542 aaPredicted RBP16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 PQLC1Q8N2U9 271 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 TSPEARQ8WU66 669 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 ZNF514Q96K75 400 aaPredicted RBP16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 ACAT2Q9BWD1 397 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 TEX101Q9BY14 249 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 DPY30Q9C005 99 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 WDR26Q9H7D7 661 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 WDR37Q9Y2I8 494 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 SPEGQ15772 3267 aa16.71■□□□□ 0.26
TMEM50B-210ENST00000542230 PCM1Q15154 2024 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 C17orf113A0A1B0GUU1 675 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 MAGEB17A8MXT2 336 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 NARSO43776 548 aaKnown RBP16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 DFNA5O60443 496 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 GRIA3P42263 894 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 GSK3BP49841 420 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 ADPRHP54922 357 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 GTDC1Q4AE62 458 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 COQ5Q5HYK3 327 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 CACHD1Q5VU97 1274 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 ANKRD46Q86W74 232 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 SPPL2CQ8IUH8 684 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 ZNF740Q8NDX6 193 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 OR9A1PQ8NGU1 263 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 ATL1Q8WXF7 558 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 IKZF5Q9H5V7 419 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 KCNK12Q9HB15 430 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 VAPAQ9P0L0 249 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 PPT2Q9UMR5 302 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3DA0A087WVF3 549 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3IA0A087WXS9 549 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3EA0A087X179 549 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3KA0A087X1G2 549 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3FA6NER0 549 aaPredicted RBP16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 ZNF839A8K0R7 811 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3LB9A6J9 549 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3HP0C7X1 549 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TRIM23P36406 574 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 LIPEQ05469 1076 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3GQ6DHY5 549 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3CQ6IPX1 549 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TMEM92Q6UXU6 159 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 SLCO4C1Q6ZQN7 724 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 LRRTM4Q86VH4 590 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 TBC1D3Q8IZP1 549 aaPredicted RBP16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 RSRC1Q96IZ7 334 aaKnown RBP16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 C1QTNF2Q9BXJ5 285 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 SGK2Q9HBY8 427 aa16.7■□□□□ 0.26
TMEM50B-210ENST00000542230 SHISA7A6NL88 538 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 AXIN1O15169 862 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 AKAP10O43572 662 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 RNGTTO60942 597 aaKnown RBP16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 ACP5P13686 325 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 AMD1P17707 334 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 ATP6V1C1P21283 382 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 MAP7D1Q3KQU3 841 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 TMEM259Q4ZIN3 620 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 LIPJQ5W064 366 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 DHFR2Q86XF0 187 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 SLC44A3Q8N4M1 653 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 CHCHD4Q8N4Q1 142 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 OR7G3Q8NG95 312 aa16.69■□□□□ 0.26
TMEM50B-210ENST00000542230 SLC13A3Q8WWT9 602 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms