RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 DSG4Q86SJ6 1040 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 LDB1Q86U70 411 aaPredicted RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 CUZD1Q86UP6 607 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 DCLK2Q8N568 766 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 C10orf53Q8N6V4 93 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 LINC00469Q8N7U9 141 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 LMNTD1Q8N9Z9 388 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 DMBX1Q8NFW5 382 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 RDM1Q8NG50 284 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 SPATA18Q8TC71 538 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 SNF8Q96H20 258 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 CABS1Q96KC9 395 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 ZNF583Q96ND8 569 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 INPP4AQ96PE3 977 aaPredicted RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 UQCC2Q9BRT2 126 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 LRRC1Q9BTT6 524 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 NACAP1Q9BZK3 213 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 UBXN6Q9BZV1 441 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 GOLPH3LQ9H4A5 285 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 RAD21L1Q9H4I0 556 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 NOL11Q9H8H0 719 aaKnown RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 DDX43Q9NXZ2 648 aaKnown RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 LARSQ9P2J5 1176 aaKnown RBP3.09□□□□□ -1.91
USP28-210ENST00000542033 DNAJB9Q9UBS3 223 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 TUBGCP4Q9UGJ1 667 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 TBK1Q9UHD2 729 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 LCMT1Q9UIC8 334 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 TSPYL4Q9UJ04 414 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 SATB2Q9UPW6 733 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 DLGAP4Q9Y2H0 992 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 LIPGQ9Y5X9 500 aa3.09□□□□□ -1.91
USP28-210ENST00000542033 FHAD1B1AJZ9 1412 aa3.09□□□□□ -1.92
USP28-210ENST00000542033 SETD5Q9C0A6 1442 aa3.09□□□□□ -1.92
USP28-210ENST00000542033 ARHGEF40Q8TER5 1519 aa3.09□□□□□ -1.92
USP28-210ENST00000542033 A0A087WV48 116 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 IQANK1A0A1B0GTG1 560 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 ZCWPW2A0A1B0GU75 182 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 HTR3EA5X5Y0 456 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 TMEM8BA6NDV4 472 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 OR5K3A6NET4 321 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 OR6C76A6NM76 312 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 ANXA2P2A6NMY6 339 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 C15orf62A8K5M9 175 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 ANKRD66B4E2M5 251 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 H0YAE9 185 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 TMEM178BH3BS89 294 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 NDUFAB1O14561 156 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 EIF3DO15371 548 aaKnown RBP eCLIP3.08□□□□□ -1.92
USP28-210ENST00000542033 PLPP2O43688 288 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 XPNPEP2O43895 674 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 LMX1BO60663 402 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 FMO6PO60774 539 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 PRAMEF11O60813 436 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 ZNF254O75437 659 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 SLCO2B1O94956 709 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 CRYAAP02489 173 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 HSPA8P11142 646 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 EZRP15311 586 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 PFKFB1P16118 471 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 STMN1P16949 149 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 ZNF23P17027 643 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 POLR2EP19388 210 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 ACHEP22303 614 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 S100A1P23297 94 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 CA8P35219 290 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 HOXA1P49639 335 aaPredicted RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 BLVRAP53004 296 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 CD81P60033 236 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 YWHAHQ04917 246 aaPredicted RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 LRRC74AQ0VAA2 488 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 HYAL1Q12794 435 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 TRAP1Q12931 704 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 TUBB2AQ13885 445 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 DPYSQ14117 519 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 PTPRCAPQ14761 206 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 MVPQ14764 893 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 SPCS2Q15005 226 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 MEP1AQ16819 746 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 CCDC153Q494R4 210 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 SMUG1Q53HV7 270 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 CEP85LQ5SZL2 805 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 STXBP5Q5T5C0 1151 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 PLA2G4FQ68DD2 849 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 KRT39Q6A163 491 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 ABRAXAS1Q6UWZ7 409 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 RAD9BQ6WBX8 426 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 TPRG1Q6ZUI0 275 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 INTS8Q75QN2 995 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 CENPVQ7Z7K6 275 aaPredicted RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 ADIPOR2Q86V24 386 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 SIX6OS1Q8N1H7 587 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 RNF10Q8N5U6 811 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 GCSAMQ8N6F7 178 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 C1orf52Q8N6N3 182 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 KBTBD3Q8NAB2 608 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 SPC24Q8NBT2 197 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 SLC38A9Q8NBW4 561 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 RBM15BQ8NDT2 890 aaKnown RBP3.08□□□□□ -1.92
USP28-210ENST00000542033 MOSPD2Q8NHP6 518 aa3.08□□□□□ -1.92
USP28-210ENST00000542033 KCNE4Q8WWG9 221 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms