RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TYRP1P17643 537 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 TSPAN8P19075 237 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 POLR2CP19387 275 aaPredicted RBP9.03□□□□□ -0.96
DDX55-208ENST00000541259 PSMB5P28074 263 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 PEBP1P30086 187 aaKnown RBP9.03□□□□□ -0.96
DDX55-208ENST00000541259 ARRB2P32121 409 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 GGT5P36269 586 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 HNMTP50135 292 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 RAB28P51157 221 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 NAGLUP54802 743 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 CDH13P55290 713 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 OR1D5P58170 312 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 DNAJB13P59910 316 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 TBPL1P62380 186 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 HERVK_113P63132 956 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 BIRC2Q13490 618 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 PCBP2Q15366 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
DDX55-208ENST00000541259 NR0B2Q15466 257 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 CHI3L2Q15782 390 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 KIF26BQ2KJY2 2108 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 PERM1Q5SV97 790 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 ANKS6Q68DC2 871 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 GUSBP11Q6P575 273 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 ZNF438Q7Z4V0 828 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 THOC6Q86W42 341 aaKnown RBP9.03□□□□□ -0.96
DDX55-208ENST00000541259 AMIGO1Q86WK6 493 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 SLC22A9Q8IVM8 553 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 FAM20CQ8IXL6 584 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 RBM12BQ8IXT5 1001 aaKnown RBP9.03□□□□□ -0.96
DDX55-208ENST00000541259 ADGRF3Q8IZF5 1079 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 CCNYL1Q8N7R7 359 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 Q8N9G6 341 aaPredicted RBP9.03□□□□□ -0.96
DDX55-208ENST00000541259 OR6Y1Q8NGX8 325 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 OR2L8Q8NGY9 312 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 OR56A3Q8NH54 315 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 RHBDD1Q8TEB9 315 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 SETD7Q8WTS6 366 aaKnown RBP9.03□□□□□ -0.96
DDX55-208ENST00000541259 UBTD2Q8WUN7 234 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 ATL1Q8WXF7 558 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 RSC1A1Q92681 617 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 CCDC74AQ96AQ1 378 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 L3HYPDHQ96EM0 354 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 MED8Q96G25 268 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 OR4K3Q96R72 315 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 SLC38A3Q99624 504 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 ERVK-6Q9BXR3 956 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 SRMSQ9H3Y6 488 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 GSTO2Q9H4Y5 243 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 ZNF395Q9H8N7 513 aaPredicted RBP9.03□□□□□ -0.96
DDX55-208ENST00000541259 OGFRQ9NZT2 677 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 LNPEPQ9UIQ6 1025 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 PCTPQ9UKL6 214 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 TMCO1Q9UM00 188 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 SLC22A14Q9Y267 594 aa9.03□□□□□ -0.96
DDX55-208ENST00000541259 PTPRZ1P23471 2315 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 A0A1B0GTL3 188 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 K7EPI3 171 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 E2F3O00716 465 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 NUDT21O43809 227 aaKnown RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 PRICKLE3O43900 615 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 PRAMEF4O60810 478 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 LYPLA1O75608 230 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 SUPT7LO94864 414 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 WDR47O94967 919 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 LDOC1O95751 146 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 RPS17P08708 135 aaKnown RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 CHRM5P08912 532 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 NEFHP12036 1026 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 GLB1P16278 677 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 NPPBP16860 134 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 EPORP19235 508 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 ALDH4A1P30038 563 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 SHMT2P34897 504 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 HSD17B2P37059 387 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 GRK6P43250 576 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 PPP1CAP62136 330 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 FOXC1Q12948 553 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 ARHGAP19Q14CB8 494 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 PRAMEF9Q5VWM5 478 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 NKAIN2Q5VXU1 208 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 EFL1Q7Z2Z2 1120 aaKnown RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 GOLGA7Q7Z5G4 137 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 RAB44Q7Z6P3 723 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 KLHDC8AQ8IYD2 350 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 LSMEM2Q8N112 164 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 TCAIMQ8N3R3 496 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 TEX9Q8N6V9 391 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 SNX31Q8N9S9 440 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 OR10G6Q8NH81 332 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 FLVCR1-AS1Q8TAF5 88 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 HMGCLL1Q8TB92 370 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 ZNF483Q8TF39 744 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 DYDC1Q8WWB3 177 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 CKAP2Q8WWK9 683 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 SMPDL3AQ92484 453 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 ZNF75CPQ92670 426 aaPredicted RBP9.02□□□□□ -0.97
DDX55-208ENST00000541259 SH3KBP1Q96B97 665 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 CCDC126Q96EE4 140 aa9.02□□□□□ -0.97
DDX55-208ENST00000541259 CNDP2Q96KP4 475 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms