RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 HERC3Q15034 1050 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 CHRNA6Q15825 494 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 ARSIQ5FYB1 569 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 SP5Q6BEB4 398 aaPredicted RBP8.15□□□□□ -1.1
CHD4-208ENST00000540960 SULT1C3Q6IMI6 304 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 ZCCHC23Q6ZST2 131 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 FAM9CQ8IZT9 166 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 OXR1Q8N573 874 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 EFCAB3Q8N7B9 438 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 TEX19Q8NA77 164 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 PHC3Q8NDX5 983 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 OR56A4Q8NGH8 313 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 OR6K2Q8NGY2 324 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 CPT1CQ8TCG5 803 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 ASZ1Q8WWH4 475 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 ATL1Q8WXF7 558 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 LINGO1Q96FE5 620 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 SORT1Q99523 831 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 BTBD10Q9BSF8 475 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 SPATA16Q9BXB7 569 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 C1QTNF7Q9BXJ2 289 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 HDAC8Q9BY41 377 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 MTG2Q9H4K7 406 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 COG4Q9H9E3 785 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 RIC8BQ9NVN3 520 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 ZNF358Q9NW07 568 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 CD274Q9NZQ7 290 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 B4GALT6Q9UBX8 382 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 KCND3Q9UK17 655 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 SCML1Q9UN30 329 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 TRAF6Q9Y4K3 522 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 WASF2Q9Y6W5 498 aa8.15□□□□□ -1.1
CHD4-208ENST00000540960 FN1P02751 2386 aaKnown RBP8.15□□□□□ -1.1
CHD4-208ENST00000540960 CHD5Q8TDI0 1954 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 NPIPB15A6NHN6 443 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 TTLL8A6PVC2 850 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 TTC34A8MYJ7 566 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 GPR89AB7ZAQ6 455 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 KPNA3O00505 521 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 CCL22O00626 93 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 NEMP1O14524 444 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 NVLO15381 856 aaKnown RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 TSPAN6O43657 245 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ITM2AO43736 263 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 CIB2O75838 187 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 SLC25A14O95258 325 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 NADKO95544 446 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 ADH1BP00325 375 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 OTCP00480 354 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 DNTTP04053 509 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ENO1P06733 434 aaKnown RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 ELFN1P0C7U0 828 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 GPR89BP0CG08 455 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ATP1B2P14415 290 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 TIMP2P16035 220 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ITIH1P19827 911 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 AKT1P31749 480 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ETV5P41161 510 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ATP4BP51164 291 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 CLCN7P51798 805 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 AP1S2P56377 157 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 STX1BP61266 288 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 NCALDP61601 193 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 PTSQ03393 145 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 STX5Q13190 355 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 GTF2H3Q13889 308 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 SEMA3AQ14563 771 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 SETMARQ53H47 684 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 ZNF789Q5FWF6 425 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ZNF678Q5SXM1 525 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ASRGL1Q7L266 308 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 RAB11FIP2Q7L804 512 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 LDB1Q86U70 411 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 PHYKPLQ8IUZ5 450 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 PIANPQ8IYJ0 282 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 CPSF7Q8N684 471 aaKnown RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 ZNF781Q8N8C0 355 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 PTGR2Q8N8N7 351 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 DDHD1Q8NEL9 900 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ACVR1CQ8NER5 493 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 CD200R1Q8TD46 325 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 FOPNLQ96NB1 174 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ATOH8Q96SQ7 321 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 SERPINI1Q99574 410 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 PCDH12Q9NPG4 1184 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 PRSS16Q9NQE7 514 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 PRDM8Q9NQV8 689 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 MARCOQ9UEW3 520 aaPredicted RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 PISDQ9UG56 409 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ENTPD4Q9Y227 616 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 OARD1Q9Y530 152 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 ANGPTL3Q9Y5C1 460 aa8.14□□□□□ -1.11
CHD4-208ENST00000540960 DIDO1Q9BTC0 2240 aaKnown RBP8.14□□□□□ -1.11
CHD4-208ENST00000540960 DYTNA2CJ06 578 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 K7ESM1 405 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 AZIN1O14977 448 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 NKX2-8O15522 239 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 AP1G1O43747 822 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 ZBTB14O43829 449 aa8.13□□□□□ -1.11
CHD4-208ENST00000540960 VEGFDO43915 354 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms