RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 IMPA1P29218 277 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 CRHR1P34998 444 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 GGT5P36269 586 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 PIK3CGP48736 1102 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 HSD11B2P80365 405 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 RELAQ04206 551 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 SF1Q15637 639 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 PHKG1Q16816 387 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 PHF19Q5T6S3 580 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 THEMIS2Q5TEJ8 643 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 TBC1D19Q8N5T2 526 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 GOLGA6L1Q8N7Z2 621 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 OR8K5Q8NH50 307 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 OR2W6PQ8NHA6 318 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 WDR36Q8NI36 951 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 RDH11Q8TC12 318 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 DENND1AQ8TEH3 1009 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 DLG3Q92796 817 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 GATA6Q92908 595 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 TCTN2Q96GX1 697 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 SCYL1Q96KG9 808 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 NUDT22Q9BRQ3 303 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 SEMA6CQ9H3T2 930 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 XKR8Q9H6D3 395 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 ALG9Q9H6U8 611 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 SSU72Q9NP77 194 aaKnown RBP16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 PCMTD2Q9NV79 361 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 SNX7Q9UNH6 387 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 KLK4Q9Y5K2 254 aa16.92■□□□□ 0.3
CLSTN3-210ENST00000540931 TMEM8BA6NDV4 472 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 GUCA1CO95843 209 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 UGT2B7P16662 529 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 ACY1Q03154 408 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 SLC18A2Q05940 514 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 PRDX1Q06830 199 aaKnown RBP16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 ZC3H12BQ5HYM0 836 aaKnown RBP16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 TMEM164Q5U3C3 297 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 LCTLQ6UWM7 567 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 TRABD2AQ86V40 505 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 SLC22A9Q8IVM8 553 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 KLHDC8AQ8IYD2 350 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 LINC01555Q8NAE3 123 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 OR56A3Q8NH54 315 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 SREK1Q8WXA9 508 aaKnown RBP16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 KLHL6Q8WZ60 621 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 RHBDF1Q96CC6 855 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 OR2A14Q96R47 310 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 ATOH8Q96SQ7 321 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 ZPBPQ9BS86 351 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 SCNM1Q9BWG6 230 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 SGPP1Q9BX95 441 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 NRSN2Q9GZP1 204 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 FANCEQ9HB96 536 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 PDE7BQ9NP56 450 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 WWOXQ9NZC7 414 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 GPRC5BQ9NZH0 403 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 ATXN7L1Q9ULK2 861 aaPredicted RBP16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 PLAGL1Q9UM63 463 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 BTRCQ9Y297 605 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 NEUROG3Q9Y4Z2 214 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 KCNE2Q9Y6J6 123 aa16.91■□□□□ 0.3
CLSTN3-210ENST00000540931 SUPT3HB4E1H0 165 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 PRICKLE3O43900 615 aaPredicted RBP16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 SUPT3HO75486 399 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 GFAPP14136 432 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 NELFEP18615 380 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 CSF2RBP32927 897 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 GRK3P35626 688 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 RAB15P59190 212 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 ASPHQ12797 758 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 CCSMST1Q4G0I0 132 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 TECRLQ5HYJ1 363 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 C17orf64Q86WR6 236 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 PTERQ96BW5 349 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 SLC41A2Q96JW4 573 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 CCDC74BQ96LY2 380 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 GPR78Q96P69 363 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 FCRL4Q96PJ5 515 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 TEFMQ96QE5 360 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 PITHD1Q9GZP4 211 aaPredicted RBP16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 MRPS30Q9NP92 439 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 PTBP2Q9UKA9 531 aaKnown RBP16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 DYRK1BQ9Y463 629 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 PCDHGA8Q9Y5G5 932 aa16.9■□□□□ 0.3
CLSTN3-210ENST00000540931 ANKRD11Q6UB99 2663 aaPredicted RBP16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 UQCRHLA0A096LP55 91 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 SRRM3A6NNA2 597 aaPredicted RBP16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 B4E171 279 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 STX16-NPEPL1H3BU86 382 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 STX16O14662 325 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 MAP2K7O14733 419 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 KLK8O60259 260 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 KATNA1O75449 491 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 STK16O75716 305 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 UQCRHP07919 91 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 CXCR2P25025 360 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 TSPAN7P41732 249 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 IRF9Q00978 393 aa16.89■□□□□ 0.29
CLSTN3-210ENST00000540931 CFHR1Q03591 330 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms