RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 GJB3O75712 270 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 WDHD1O75717 1129 aaPredicted RBP3.01□□□□□ -1.93
MDM2-227ENST00000540709 OXTRP30559 389 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 RXRGP48443 463 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 GSCP56915 257 aaPredicted RBP3.01□□□□□ -1.93
MDM2-227ENST00000540709 PSMC6P62333 389 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 CHAF1BQ13112 559 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 RILPL1Q5EBL4 403 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 KRT79Q5XKE5 535 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 KIF6Q6ZMV9 814 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 C1orf122Q6ZSJ8 110 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 METTL4Q8N3J2 472 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 GUF1Q8N442 669 aaKnown RBP3.01□□□□□ -1.93
MDM2-227ENST00000540709 APOBEC4Q8WW27 367 aaKnown RBP3.01□□□□□ -1.93
MDM2-227ENST00000540709 SLAMF9Q96A28 289 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 JAKMIP2Q96AA8 810 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 PTERQ96BW5 349 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 SPACA9Q96E40 222 aaPredicted RBP3.01□□□□□ -1.93
MDM2-227ENST00000540709 FAM20AQ96MK3 541 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 CCDC3Q9BQI4 270 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 PANK2Q9BZ23 570 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 NYXQ9GZU5 481 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 WNT5BQ9H1J7 359 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 GOLPH3LQ9H4A5 285 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 MED20Q9H944 212 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 SLC35C2Q9NQQ7 365 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 GPR83Q9NYM4 423 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 WSB2Q9NYS7 404 aaPredicted RBP3.01□□□□□ -1.93
MDM2-227ENST00000540709 TP53TG3Q9ULZ0 132 aa3.01□□□□□ -1.93
MDM2-227ENST00000540709 LOC100509620A0A075B734 347 aa3□□□□□ -1.93
MDM2-227ENST00000540709 IGHV3OR16-10A0A075B7F0 116 aa3□□□□□ -1.93
MDM2-227ENST00000540709 AGAP14A8MT82 685 aa3□□□□□ -1.93
MDM2-227ENST00000540709 MPTX1A8MV57 137 aa3□□□□□ -1.93
MDM2-227ENST00000540709 EPM2AB3EWF7 344 aa3□□□□□ -1.93
MDM2-227ENST00000540709 HPRP00739 348 aa3□□□□□ -1.93
MDM2-227ENST00000540709 CAPN3P20807 821 aa3□□□□□ -1.93
MDM2-227ENST00000540709 PGFP49763 221 aa3□□□□□ -1.93
MDM2-227ENST00000540709 MAPK12P53778 367 aa3□□□□□ -1.93
MDM2-227ENST00000540709 GEMIN4P57678 1058 aaKnown RBP3□□□□□ -1.93
MDM2-227ENST00000540709 SNAPC1Q16533 368 aa3□□□□□ -1.93
MDM2-227ENST00000540709 ZNF74Q16587 644 aa3□□□□□ -1.93
MDM2-227ENST00000540709 PDLIM3Q53GG5 364 aaPredicted RBP3□□□□□ -1.93
MDM2-227ENST00000540709 SLC25A30Q5SVS4 291 aa3□□□□□ -1.93
MDM2-227ENST00000540709 CHMP1BQ7LBR1 199 aa3□□□□□ -1.93
MDM2-227ENST00000540709 NUDT13Q86X67 352 aa3□□□□□ -1.93
MDM2-227ENST00000540709 LINC00346Q8IVM7 164 aa3□□□□□ -1.93
MDM2-227ENST00000540709 MMD2Q8IY49 270 aa3□□□□□ -1.93
MDM2-227ENST00000540709 FBXL16Q8N461 479 aa3□□□□□ -1.93
MDM2-227ENST00000540709 LINC00612Q8N6U2 182 aa3□□□□□ -1.93
MDM2-227ENST00000540709 SLC37A3Q8NCC5 494 aa3□□□□□ -1.93
MDM2-227ENST00000540709 PRSS33Q8NF86 280 aa3□□□□□ -1.93
MDM2-227ENST00000540709 PTPMT1Q8WUK0 201 aaPredicted RBP3□□□□□ -1.93
MDM2-227ENST00000540709 PIGBQ92521 554 aa3□□□□□ -1.93
MDM2-227ENST00000540709 SPAG5Q96R06 1193 aa3□□□□□ -1.93
MDM2-227ENST00000540709 SEPHS2Q99611 448 aa3□□□□□ -1.93
MDM2-227ENST00000540709 PUS3Q9BZE2 481 aaKnown RBP3□□□□□ -1.93
MDM2-227ENST00000540709 TRPV4Q9HBA0 871 aa3□□□□□ -1.93
MDM2-227ENST00000540709 CHST11Q9NPF2 352 aa3□□□□□ -1.93
MDM2-227ENST00000540709 EQTNQ9NQ60 294 aa3□□□□□ -1.93
MDM2-227ENST00000540709 NME7Q9Y5B8 376 aa3□□□□□ -1.93
MDM2-227ENST00000540709 ZNF541Q9H0D2 1346 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 IGLV3-10A0A075B6K4 115 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 LOC102723996A0A087X1L8 192 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 hCG_1807616A0A1W2PRN6 198 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 ANKRD18BA2A2Z9 1011 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 A8MXK9 166 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 THEGLP0DJG4 465 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 CSH1P0DML2 217 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 CSH2P0DML3 217 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 HAPLN1P10915 354 aaPredicted RBP2.99□□□□□ -1.93
MDM2-227ENST00000540709 PFKFB1P16118 471 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 RPL35AP18077 110 aaKnown RBP2.99□□□□□ -1.93
MDM2-227ENST00000540709 PDHA2P29803 388 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 HLA-FP30511 346 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 CAPGP40121 348 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 PTGER3P43115 390 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 ZNF75DP51815 510 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 CSNK2BP67870 215 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 GUCY2DQ02846 1103 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 CDH18Q13634 790 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 WTAPQ15007 396 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 EFTUD2Q15029 972 aaKnown RBP eCLIP2.99□□□□□ -1.93
MDM2-227ENST00000540709 NTRK2Q16620 822 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 PHKG1Q16816 387 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 C15orf59Q2T9L4 293 aaPredicted RBP2.99□□□□□ -1.93
MDM2-227ENST00000540709 UGT3A2Q3SY77 523 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 C6orf163Q5TEZ5 329 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 ITPRIPL1Q6GPH6 555 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 UGT3A1Q6NUS8 523 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 MFSD12Q6NUT3 480 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 HPS6Q86YV9 775 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 C11orf53Q8IXP5 236 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 ZNF595Q8IYB9 648 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 C11orf45Q8TAV5 145 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 ATXN7L3BQ96GX2 97 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 SLC45A3Q96JT2 553 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 GAL3ST4Q96RP7 486 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 TDRD1Q9BXT4 1180 aaKnown RBP2.99□□□□□ -1.93
MDM2-227ENST00000540709 TEX12Q9BXU0 123 aa2.99□□□□□ -1.93
MDM2-227ENST00000540709 GHITMQ9H3K2 345 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms