RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 C19orf43Q9BQ61 176 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ALOXE3Q9BYJ1 711 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ASPSCR1Q9BZE9 553 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ZFYVE1Q9HBF4 777 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 GPBP1L1Q9HC44 474 aaPredicted RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 IL26Q9NPH9 171 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 AASSQ9UDR5 926 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 NDRG4Q9ULP0 352 aaKnown RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 ABCG2Q9UNQ0 655 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 TRBV5-4A0A0C4DH59 114 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 RGS10O43665 173 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 CNOT3O75175 753 aaKnown RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 ZNF682O95780 498 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 PCSK2P16519 638 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 EPORP19235 508 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ITGALP20701 1170 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 CD300CQ08708 224 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 GTF2H3Q13889 308 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ARHGEF7Q14155 803 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 LAPTM4AQ15012 233 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 CPSF6Q16630 551 aaKnown RBP eCLIP11.97□□□□□ -0.49
NPC1-202ENST00000540608 PGS1Q32NB8 556 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ATXN7L2Q5T6C5 722 aaPredicted RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 RNF180Q86T96 592 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 TSPYL5Q86VY4 417 aaPredicted RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 CADM3Q8N126 398 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ZNF540Q8NDQ6 660 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 MYO19Q96H55 970 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 CASD1Q96PB1 797 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 SLC32A1Q9H598 525 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 TMEM165Q9HC07 324 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 CCNB1IP1Q9NPC3 277 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 ACOT13Q9NPJ3 140 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 AASDHPPTQ9NRN7 309 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 DNMT3BQ9UBC3 853 aaKnown RBP11.97□□□□□ -0.49
NPC1-202ENST00000540608 PPT2Q9UMR5 302 aa11.97□□□□□ -0.49
NPC1-202ENST00000540608 H7C4K7 107 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 RFXANKO14593 260 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 ADAM12O43184 909 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 MT-ND2P03891 347 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 FPR1P21462 350 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 PSMB9P28065 219 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 MZF1P28698 734 aaPredicted RBP11.96□□□□□ -0.49
NPC1-202ENST00000540608 TMED10P49755 219 aaKnown RBP11.96□□□□□ -0.49
NPC1-202ENST00000540608 IL1RL1Q01638 556 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 TTC23LQ6PF05 361 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 CCDC81Q6ZN84 652 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 MSANTD1Q6ZTZ1 278 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 PRSS48Q7RTY5 328 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 SNX29P2Q8IUI4 249 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 TTC29Q8NA56 475 aaPredicted RBP11.96□□□□□ -0.49
NPC1-202ENST00000540608 SELENOMQ8WWX9 145 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 OVCA2Q8WZ82 227 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 ABHD8Q96I13 439 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 HHIPQ96QV1 700 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 BTBD2Q9BX70 525 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 LATS2Q9NRM7 1088 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 RNF186Q9NXI6 227 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 FCF1Q9Y324 198 aaKnown RBP11.96□□□□□ -0.49
NPC1-202ENST00000540608 EVPLLA8MZ36 301 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 MYO1GB0I1T2 1018 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 AQP9O43315 295 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 SEMG1P04279 462 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 NTRK1P04629 796 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 ANXA5P08758 320 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 PRPH2P23942 346 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 ALDH4A1P30038 563 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 FADDQ13158 208 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 MAD2L1BPQ15013 274 aaPredicted RBP11.96□□□□□ -0.49
NPC1-202ENST00000540608 PLEKHG6Q3KR16 790 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 CDKL4Q5MAI5 379 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 MBOAT1Q6ZNC8 495 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 LGALS12Q96DT0 336 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 CMTM7Q96FZ5 175 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 TSSK3Q96PN8 268 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 HTATIP2Q9BUP3 242 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 THG1LQ9NWX6 298 aaKnown RBP11.96□□□□□ -0.49
NPC1-202ENST00000540608 GPRC5BQ9NZH0 403 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 ITGB1BP2Q9UKP3 347 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 SH3BP1Q9Y3L3 701 aa11.96□□□□□ -0.49
NPC1-202ENST00000540608 B3GALT4O96024 378 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 FABP3P05413 133 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 TACR1P25103 407 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 MAPK1P28482 360 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 HOXA9P31269 272 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 AP1S1P61966 158 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 NCS1P62166 190 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 SLC14A1Q13336 389 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 DGCR6Q14129 220 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 TMEM236Q5W0B7 351 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 PLEKHG7Q6ZR37 379 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 BCL7CQ8WUZ0 217 aaPredicted RBP11.96□□□□□ -0.5
NPC1-202ENST00000540608 IPCEF1Q8WWN9 437 aaPredicted RBP11.96□□□□□ -0.5
NPC1-202ENST00000540608 SLIRPQ9GZT3 109 aaKnown RBP11.96□□□□□ -0.5
NPC1-202ENST00000540608 PDP1Q9P0J1 537 aaPredicted RBP11.96□□□□□ -0.5
NPC1-202ENST00000540608 CRLS1Q9UJA2 301 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 RPS6KA6Q9UK32 745 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 SNX6Q9UNH7 406 aa11.96□□□□□ -0.5
NPC1-202ENST00000540608 TTC34A8MYJ7 566 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms