RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PSME2Q9UL46 239 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 CLEC4AQ9UMR7 237 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 VPS4AQ9UN37 437 aa9.75□□□□□ -0.85
TRAF1-202ENST00000540010 ZNF99A8MXY4 864 aaPredicted RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 SCELO95171 688 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ANXA4P09525 319 aaPredicted RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 G6PDP11413 515 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 COPZ1P61923 177 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ELP6Q0PNE2 266 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 IHHQ14623 411 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 QPRTQ15274 297 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ZNF783Q6ZMS7 281 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 KRT74Q7RTS7 529 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 MFSD6LQ8IWD5 586 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 C7orf61Q8IZ16 206 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 CDK20Q8IZL9 346 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 CMTM8Q8IZV2 173 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 KAT2AQ92830 837 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 REPS1Q96D71 796 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 KCNS3Q9BQ31 491 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 RHBGQ9H310 441 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 POLR3BQ9NW08 1133 aaPredicted RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 MAFFQ9ULX9 164 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 A0A1W2PP18 115 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 FAM234BA2RU67 622 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 PRORSD1PA6NEY8 169 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 LEFTY2O00292 366 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 TPST2O60704 377 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 LATS1O95835 1130 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 PRSS56P0CW18 603 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 PSMA1P25786 263 aaKnown RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 STX4Q12846 297 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 GRB7Q14451 532 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 CYP2A13Q16696 494 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ZFP69Q49AA0 526 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 COLEC12Q5KU26 742 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ARTNQ5T4W7 220 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 TRIM48Q8IWZ4 208 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 APCDD1Q8J025 514 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 DCAF4L2Q8NA75 395 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 POF1BQ8WVV4 589 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ATL1Q8WXF7 558 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 CLP1Q92989 425 aaKnown RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 PPCDCQ96CD2 204 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 HCFC1R1Q9NWW0 138 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ASF1AQ9Y294 204 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 FAM240BA0A1B0GVZ2 78 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 EFCAB9A8MZ26 197 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 STK25O00506 426 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 FFAR2O15552 330 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 RFPL2O75678 378 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 AGTR2P50052 363 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 MANFP55145 182 aaKnown RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 GPAT3Q53EU6 434 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 NEK10Q6ZWH5 1172 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ADGRG6Q86SQ4 1221 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 SPNS2Q8IVW8 549 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 IZUMO1Q8IYV9 350 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 MARVELD2Q8N4S9 558 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 EEF1AKMT1Q8WVE0 214 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ISOC1Q96CN7 298 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 DIRAS2Q96HU8 199 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 SORT1Q99523 831 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 RAD9AQ99638 391 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 TFB2MQ9H5Q4 396 aaKnown RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ITM2CQ9NQX7 267 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ABCB8Q9NUT2 735 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 INTS10Q9NVR2 710 aaKnown RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 C1orf109Q9NX04 203 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 CXXC1Q9P0U4 656 aaPredicted RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 ANGPT4Q9Y264 503 aa9.74□□□□□ -0.85
TRAF1-202ENST00000540010 GPC6Q9Y625 555 aaPredicted RBP9.74□□□□□ -0.85
TRAF1-202ENST00000540010 NEDD8-MDP1E9PL57 170 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 CASKO14936 926 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 XPNPEP2O43895 674 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 GSRP00390 522 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 OPN1SWP03999 348 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 OGNP20774 298 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 CDKN2DP55273 166 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 OR52E8Q6IFG1 317 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 CERS6Q6ZMG9 384 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 R3HCC1LQ7Z5L2 792 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 TMEM150AQ86TG1 271 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 KBTBD6Q86V97 674 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ZBTB2Q8N680 514 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 DRAXINQ8NBI3 349 aaPredicted RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 FLCNQ8NFG4 579 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 AURKBQ96GD4 344 aaPredicted RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ZCCHC2Q9C0B9 1178 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 IL21Q9HBE4 155 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 RAD18Q9NS91 495 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 INTS7Q9NVH2 962 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 NLE1Q9NVX2 485 aaPredicted RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 MRPL39Q9NYK5 338 aaKnown RBP9.73□□□□□ -0.85
TRAF1-202ENST00000540010 NKIRAS2Q9NYR9 191 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 PCDHB1Q9Y5F3 818 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 A0A0U1RQS6 177 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 XYLBO75191 536 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 ALPIP09923 528 aa9.73□□□□□ -0.85
TRAF1-202ENST00000540010 GKP32189 559 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms