RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 VSX2P58304 361 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 CACNG1Q06432 222 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 PRPSAP1Q14558 356 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 SF1Q15637 639 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 DBN1Q16643 649 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 ASTE1Q2TB18 679 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 SYTL3Q4VX76 610 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 KRTCAP3Q53RY4 240 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 DNAJC21Q5F1R6 531 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 HIBCHQ6NVY1 386 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 CNSTQ6PJW8 725 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 Q6ZPB1 254 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 MICALCLQ6ZW33 695 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 GAS2L3Q86XJ1 694 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 SPPL2CQ8IUH8 684 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 RHOT2Q8IXI1 618 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 C2orf73Q8N5S3 287 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 ACBD4Q8NC06 268 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 THAP3Q8WTV1 239 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 HAUS1Q96CS2 278 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 CDKN2AIPNLQ96HQ2 116 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 DNAJC1Q96KC8 554 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 MENTQ9BUN1 341 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 C10orf88Q9H8K7 445 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 NLE1Q9NVX2 485 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 STMN3Q9NZ72 180 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 FEZ2Q9UHY8 353 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 MEMO1Q9Y316 297 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 NEU2Q9Y3R4 380 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 HYOU1Q9Y4L1 999 aa11.08□□□□□ -0.64
CLSTN3-209ENST00000539982 IDSB3KWA1 339 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 H7C0C1 242 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 CTSVO60911 334 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 FKBP9O95302 570 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 MED26O95402 600 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 GYPCP04921 128 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 CELA2AP08217 269 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ICAM2P13598 275 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 COMTP21964 271 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 PSMB4P28070 264 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ATP5OP48047 213 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 AP2B1P63010 937 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ITIH4Q14624 930 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ANKRD20A2Q5SQ80 823 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ANKRD20A1Q5TYW2 823 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ABHD17BQ5VST6 288 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ANKRD20A3Q5VUR7 823 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 PACS1Q6VY07 963 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ARHGEF18Q6ZSZ5 1173 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 RCOR2Q8IZ40 523 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 LMNTD1Q8N9Z9 388 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 OR2L8Q8NGY9 312 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 MAGED4Q96JG8 741 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 TBL1YQ9BQ87 522 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 FERMT1Q9BQL6 677 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 RIC8BQ9NVN3 520 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 ZC3H7BQ9UGR2 993 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 CACNA1CQ13936 2221 aa11.07□□□□□ -0.64
CLSTN3-209ENST00000539982 hCG_1818297A0A087WSY0 165 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 LOC102723996A0A087X1L8 192 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 FANCGO15287 622 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 SPOPO43791 374 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 ZRANB2O95218 330 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 MLYCDO95822 493 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 RPN2P04844 631 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 OR56A5P0C7T3 313 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 ITGAMP11215 1152 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 HOXB4P17483 251 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 FBLP22087 321 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 UBASH3AP57075 661 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 CSNK1G2P78368 415 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 PMP22Q01453 160 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 EEF1A2Q05639 463 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 GRB7Q14451 532 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 SPARCL1Q14515 664 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 IQCB1Q15051 598 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 LONRF1Q17RB8 773 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 MUM1Q2TAK8 710 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 ZNF766Q5HY98 468 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 FRMPD2BQ6IN97 320 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 MEX3BQ6ZN04 569 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 TAX1BP1Q86VP1 789 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 SLC22A15Q8IZD6 547 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 GPR137Q96N19 417 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 IL17FQ96PD4 163 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 PPP1R2P1Q96PQ5 205 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 TREX2Q9BQ50 279 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 ZNF700Q9H0M5 742 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 TEKT2Q9UIF3 430 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 CDC14AQ9UNH5 594 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 PCDHGB6Q9Y5F9 930 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 FAM169AQ9Y6X4 670 aa11.06□□□□□ -0.64
CLSTN3-209ENST00000539982 LOC105369274A0A096LPK9 316 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 LOC102723532A0A0G2JNH3 316 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 A0A0J9YVX5 310 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 APOC4-APOC2K7ER74 178 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 RASGRF2O14827 1237 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 PSTPIP1O43586 416 aa11.05□□□□□ -0.64
CLSTN3-209ENST00000539982 AKR1B10O60218 316 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms