RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MRPL40Q9NQ50 206 aaKnown RBP21.75■■□□□ 1.07
HOMER3-204ENST00000539827 SH2B3Q9UQQ2 575 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 PLEKHM1Q9Y4G2 1056 aa21.75■■□□□ 1.07
HOMER3-204ENST00000539827 TCRBV21S2A2A0A5A6 115 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 PRORSD1PA6NEY8 169 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 MAP3K7O43318 606 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 LATO43561 262 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 PNLIPRP1P54315 467 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 DDX39BQ13838 428 aaKnown RBP21.74■■□□□ 1.07
HOMER3-204ENST00000539827 USP39Q53GS9 565 aaKnown RBP21.74■■□□□ 1.07
HOMER3-204ENST00000539827 WLSQ5T9L3 541 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 SLC2A7Q6PXP3 512 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 KBTBD6Q86V97 674 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 LRRC56Q8IYG6 542 aaPredicted RBP21.74■■□□□ 1.07
HOMER3-204ENST00000539827 C2orf73Q8N5S3 287 aaPredicted RBP21.74■■□□□ 1.07
HOMER3-204ENST00000539827 NRG4Q8WWG1 115 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 NEIL2Q969S2 332 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 APIPQ96GX9 242 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 NRTNQ99748 197 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 HOPXQ9BPY8 73 aaPredicted RBP21.74■■□□□ 1.07
HOMER3-204ENST00000539827 EBF2Q9HAK2 575 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 SGK2Q9HBY8 427 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 TMEM45AQ9NWC5 275 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 ANGPTL2Q9UKU9 493 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 NDRG2Q9UN36 371 aaKnown RBP21.74■■□□□ 1.07
HOMER3-204ENST00000539827 KCNE2Q9Y6J6 123 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 CEACAM5P06731 702 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 BCKDHAP12694 445 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 TAP2Q03519 686 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 USP30Q70CQ3 517 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 TMPRSS11BQ86T26 416 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 WDR20Q8TBZ3 569 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 CMTM7Q96FZ5 175 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 UHRF1Q96T88 793 aaPredicted RBP21.74■■□□□ 1.07
HOMER3-204ENST00000539827 DPY30Q9C005 99 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 PCDHAC1Q9H158 963 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 ASIC5Q9NY37 505 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 CD300AQ9UGN4 299 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 DLGAP4Q9Y2H0 992 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 DYRK1BQ9Y463 629 aa21.74■■□□□ 1.07
HOMER3-204ENST00000539827 IFRD1O00458 451 aaPredicted RBP21.73■■□□□ 1.07
HOMER3-204ENST00000539827 SCAMP1O15126 338 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 NPPBP16860 134 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 JAK1P23458 1154 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 HNF4AP41235 474 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 CLCNKAP51800 687 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 SAMD4BQ5PRF9 694 aaKnown RBP21.73■■□□□ 1.07
HOMER3-204ENST00000539827 CATSPEREQ5SY80 951 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 DUS1LQ6P1R4 473 aaKnown RBP21.73■■□□□ 1.07
HOMER3-204ENST00000539827 SLCO4C1Q6ZQN7 724 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 MINDY1Q8N5J2 469 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 KRTCAP2Q8N6L1 136 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 FLCNQ8NFG4 579 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 BHLHE22Q8NFJ8 381 aaPredicted RBP21.73■■□□□ 1.07
HOMER3-204ENST00000539827 RAD51AP1Q96B01 352 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 MTERF1Q99551 399 aaKnown RBP21.73■■□□□ 1.07
HOMER3-204ENST00000539827 ZBTB18Q99592 522 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 SGPP1Q9BX95 441 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 TRIM8Q9BZR9 551 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 OSGEPL1Q9H4B0 414 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 PRM3Q9NNZ6 103 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 ITM2CQ9NQX7 267 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 GPRC5BQ9NZH0 403 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 SLAMF8Q9P0V8 285 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 KCNK6Q9Y257 313 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 CA5BQ9Y2D0 317 aa21.73■■□□□ 1.07
HOMER3-204ENST00000539827 SERTM1A2A2V5 107 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 GPR89AB7ZAQ6 455 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 NME4O00746 187 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 ACOT8O14734 319 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 BCAS2O75934 225 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-204ENST00000539827 GPR89BP0CG08 455 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 PCNAP12004 261 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 KELP23276 732 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 ACSL1P33121 698 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 CLDN2P57739 230 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 TFF2Q03403 129 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 CCINQ13939 588 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 ADNP2Q6IQ32 1131 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 PRMT9Q6P2P2 845 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 DCUN1D3Q8IWE4 304 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.72■■□□□ 1.07
HOMER3-204ENST00000539827 CMTM6Q9NX76 183 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 SUCOQ9UBS9 1254 aaKnown RBP21.72■■□□□ 1.07
HOMER3-204ENST00000539827 MMP17Q9ULZ9 603 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 GPSM3Q9Y4H4 160 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 KANSL1LA0AUZ9 987 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 PRPH2P23942 346 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 PCDH1Q08174 1060 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 FBXO43Q4G163 708 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 LRRC74BQ6ZQY2 392 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 SLC15A3Q8IY34 581 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 DNAJB14Q8TBM8 379 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 APOLD1Q96LR9 279 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 SUFUQ9UMX1 484 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 SLC17A4Q9Y2C5 497 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 WDR37Q9Y2I8 494 aa21.72■■□□□ 1.07
HOMER3-204ENST00000539827 H0YIV9 168 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 CACNB4O00305 520 aaPredicted RBP21.71■■□□□ 1.07
HOMER3-204ENST00000539827 SOX1O00570 391 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms