RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZUFSPQ96AP4 578 aa18.28■□□□□ 0.52
TNFRSF1A-212ENST00000539372 NUDT9Q9BW91 350 aa18.28■□□□□ 0.52
TNFRSF1A-212ENST00000539372 ACAT2Q9BWD1 397 aa18.28■□□□□ 0.52
TNFRSF1A-212ENST00000539372 CUTCQ9NTM9 273 aa18.28■□□□□ 0.52
TNFRSF1A-212ENST00000539372 C20orf96Q9NUD7 363 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1A-212ENST00000539372 SPATA7Q9P0W8 599 aa18.28■□□□□ 0.52
TNFRSF1A-212ENST00000539372 SNX12Q9UMY4 172 aa18.28■□□□□ 0.52
TNFRSF1A-212ENST00000539372 SETXQ7Z333 2677 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 A0A0J9YVX5 310 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 A0A1B0GX78 115 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 TARM1B6A8C7 271 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 FKBP9O95302 570 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 ARSFP54793 590 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 RRADP55042 308 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 CUL1Q13616 776 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 TSTA3Q13630 321 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 PPP1R7Q15435 360 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 LONRF1Q17RB8 773 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 PAPD7Q5XG87 772 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 ZNF549Q6P9A3 640 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 PPIL6Q8IXY8 311 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 METTL27Q8N6F8 245 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 TTC29Q8NA56 475 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 OR2A1Q8NGT9 310 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 GIMAP7Q8NHV1 300 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 SIGLEC10Q96LC7 697 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 ZNF451Q9Y4E5 1061 aa18.27■□□□□ 0.52
TNFRSF1A-212ENST00000539372 UBR5O95071 2799 aaPredicted RBP18.27■□□□□ 0.51
TNFRSF1A-212ENST00000539372 LOC105369274A0A096LPK9 316 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 LOC102723532A0A0G2JNH3 316 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MASP2O00187 686 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DSCR3O14972 297 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PSIP1O75475 530 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 UMODP07911 640 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MPP1Q00013 466 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 GRM7Q14831 915 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 TCTE1Q5JU00 501 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 WASHC2DQ5SRD0 308 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 RNASEH2BQ5TBB1 312 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FRMPD2BQ6IN97 320 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SUSD1Q6UWL2 747 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 OR4N4Q8N0Y3 316 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DTWD1Q8N5C7 304 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MIB2Q96AX9 1013 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PTERQ96BW5 349 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ZNF285Q96NJ3 590 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PKP4Q99569 1192 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MFRPQ9BY79 579 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DDX47Q9H0S4 455 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CCDC68Q9H2F9 335 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 G3BP2Q9UN86 482 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MED16Q9Y2X0 877 aa18.26■□□□□ 0.51
TNFRSF1A-212ENST00000539372 TTLL8A6PVC2 850 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MYO1CO00159 1063 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PEX12O00623 359 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CATP04040 527 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 EIF2S1P05198 315 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CD63P08962 238 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CMPK1P30085 196 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 OR1D4P47884 311 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 TTLL9Q3SXZ7 439 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 HSP90AA5PQ58FG0 334 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 COX15Q7KZN9 410 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PPP1R32Q7Z5V6 425 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 PPFIBP2Q8ND30 876 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 IP6K3Q96PC2 410 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 GPR21Q99679 349 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DPH7Q9BTV6 452 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SLC6A20Q9NP91 592 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FAM114A2Q9NRY5 505 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 IARS2Q9NSE4 1012 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 P4HTMQ9NXG6 502 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 GPR83Q9NYM4 423 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 STOX2Q9P2F5 926 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ASIC3Q9UHC3 531 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FBXO5Q9UKT4 447 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 KLK4Q9Y5K2 254 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MAU2Q9Y6X3 613 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FAM169AQ9Y6X4 670 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CCDC88CQ9P219 2028 aa18.25■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FITM1A5D6W6 292 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CES2O00748 559 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 BANF1O75531 89 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 HAUS5O94927 633 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MED26O95402 600 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SYF2O95926 243 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ERGP11308 486 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 RPA3P35244 121 aaPredicted RBP18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 DCAF10Q5QP82 559 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 YOD1Q5VVQ6 348 aaPredicted RBP18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SHISA6Q6ZSJ9 500 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 RNF44Q7L0R7 432 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 CALML6Q8TD86 181 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 SMPDL3AQ92484 453 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 KCNJ9Q92806 393 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 FER1L6-AS2Q96M78 137 aa18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 MRPS30Q9NP92 439 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-212ENST00000539372 ABCF3Q9NUQ8 709 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms