RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 ZNF655Q8N720 491 aaPredicted RBP14.21□□□□□ -0.13
USP28-204ENST00000537642 OR2L3Q8NG85 312 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 ASB11Q8WXH4 323 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 ZUFSPQ96AP4 578 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 LRRC39Q96DD0 335 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 PKP4Q99569 1192 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 DPH2Q9BQC3 489 aaPredicted RBP14.21□□□□□ -0.13
USP28-204ENST00000537642 NLNQ9BYT8 704 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 FAM117AQ9C073 453 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 SLC25A18Q9H1K4 315 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 FAM114A2Q9NRY5 505 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 ZC3H7BQ9UGR2 993 aaKnown RBP14.21□□□□□ -0.13
USP28-204ENST00000537642 TUBD1Q9UJT1 453 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 SNX24Q9Y343 169 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 KLK4Q9Y5K2 254 aa14.21□□□□□ -0.13
USP28-204ENST00000537642 TARM1B6A8C7 271 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 GFYI3L273 518 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 CTSVO60911 334 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 PLA2G2AP14555 144 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 AGXTP21549 392 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 MCM3P25205 808 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 CASQ1P31415 396 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 GCGRP47871 477 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 CDKN2DP55273 166 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 ETF1P62495 437 aaKnown RBP14.2□□□□□ -0.14
USP28-204ENST00000537642 ARHGAP19Q14CB8 494 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 C1orf189Q5VU69 101 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 SUSD1Q6UWL2 747 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 SYT10Q6XYQ8 523 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 KIAA0408Q6ZU52 694 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 PIWIL4Q7Z3Z4 852 aaKnown RBP14.2□□□□□ -0.14
USP28-204ENST00000537642 ANKMY2Q8IV38 441 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 FBXO15Q8NCQ5 510 aaPredicted RBP14.2□□□□□ -0.14
USP28-204ENST00000537642 SPATA4Q8NEY3 305 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 GABPB2Q8TAK5 448 aaPredicted RBP14.2□□□□□ -0.14
USP28-204ENST00000537642 SEC14L1Q92503 715 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 GBP5Q96PP8 586 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 ACAT2Q9BWD1 397 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 IRAK4Q9NWZ3 460 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 DHCR7Q9UBM7 475 aaKnown RBP14.2□□□□□ -0.14
USP28-204ENST00000537642 TRMT6Q9UJA5 497 aaKnown RBP14.2□□□□□ -0.14
USP28-204ENST00000537642 TCFL5Q9UL49 500 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 MAN2B2Q9Y2E5 1009 aa14.2□□□□□ -0.14
USP28-204ENST00000537642 MDC1Q14676 2089 aaKnown RBP14.19□□□□□ -0.14
USP28-204ENST00000537642 E7ESA3 106 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 EIF3FO00303 357 aaPredicted RBP14.19□□□□□ -0.14
USP28-204ENST00000537642 NRP2O60462 931 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 SLC16A8O95907 504 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 PNLIPRP1P54315 467 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 C2orf54Q08AI8 447 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 PDIA2Q13087 525 aaKnown RBP14.19□□□□□ -0.14
USP28-204ENST00000537642 FASTKD3Q14CZ7 662 aaKnown RBP14.19□□□□□ -0.14
USP28-204ENST00000537642 NCF4Q15080 339 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 ZC3H12BQ5HYM0 836 aaKnown RBP14.19□□□□□ -0.14
USP28-204ENST00000537642 UGT3A1Q6NUS8 523 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 GALNT7Q86SF2 657 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 PPFIBP2Q8ND30 876 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 PROKR1Q8TCW9 393 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 ADAMTS17Q8TE56 1095 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 ZNF480Q8WV37 535 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 SMPDL3AQ92484 453 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 ZNF285Q96NJ3 590 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 NDC1Q9BTX1 674 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 SLC6A20Q9NP91 592 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 PPANQ9NQ55 473 aaKnown RBP14.19□□□□□ -0.14
USP28-204ENST00000537642 TAS2R13Q9NYV9 303 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 SNX7Q9UNH6 387 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 SRPK3Q9UPE1 567 aa14.19□□□□□ -0.14
USP28-204ENST00000537642 OR2A25A4D2G3 310 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 FAM187AA6NFU0 413 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 C9J4A7 227 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 RAD51CO43502 376 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 ZBTB14O43829 449 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 SYF2O95926 243 aaKnown RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 CMPK1P30085 196 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 RPA3P35244 121 aaPredicted RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 HSD17B2P37059 387 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 SKIV2L2P42285 1042 aaKnown RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 PMS2P54278 862 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 DCDP81605 110 aaKnown RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 CBLBQ13191 982 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 TSTA3Q13630 321 aaPredicted RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 FRG1Q14331 258 aaKnown RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 PAQR3Q6TCH7 311 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 UBE2R2Q712K3 238 aaPredicted RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 RNF44Q7L0R7 432 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 APLFQ8IW19 511 aaPredicted RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 FBXO36Q8NEA4 188 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 C9orf43Q8TAL5 461 aaPredicted RBP14.18□□□□□ -0.14
USP28-204ENST00000537642 EEF1AKMT1Q8WVE0 214 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 THAP4Q8WY91 577 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 DLG3Q92796 817 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 ABHD17AQ96GS6 310 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 SELENOSQ9BQE4 189 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 ERP44Q9BS26 406 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 DPH7Q9BTV6 452 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 DPH5Q9H2P9 285 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 ENAMQ9NRM1 1142 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 TXLNGQ9NUQ3 528 aa14.18□□□□□ -0.14
USP28-204ENST00000537642 ADAMTS6Q9UKP5 1117 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms