RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MMP20O60882 483 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 EEDO75530 441 aaKnown RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 IPO13O94829 963 aaKnown RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 HTR3BO95264 441 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 SMIM6P0DI80 62 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 HNRNPCL4P0DMR1 293 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF37AP17032 561 aaPredicted RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 SYN1P17600 705 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 ADRA1BP35368 520 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF81P51508 661 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 HERVK_113P63132 956 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 PTCHD3Q3KNS1 767 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 GLYR1Q49A26 553 aaPredicted RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 PABPC1L2AQ5JQF8 200 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 SUSD4Q5VX71 490 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 TRIQKQ629K1 86 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 LAIR1Q6GTX8 287 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC27A4Q6P1M0 643 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 CHMP1BQ7LBR1 199 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 KCNMB4Q86W47 210 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 LAX1Q8IWV1 398 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 TBC1D19Q8N5T2 526 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 MS4A15Q8N5U1 240 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 OR6P1Q8NGX9 317 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 PCDH19Q8TAB3 1148 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 ITCHQ96J02 903 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 GFM1Q96RP9 751 aaKnown RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 REG4Q9BYZ8 158 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 MED28Q9H204 178 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 EMC7Q9NPA0 242 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 BTRCQ9Y297 605 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 RPH3AQ9Y2J0 694 aaPredicted RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 MPTX1A8MV57 137 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 A8MXK9 166 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 DNASE2O00115 360 aaPredicted RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 GSTA4O15217 222 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 LBPP18428 481 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 GGT1P19440 569 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 LHCGRP22888 699 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 S100PP25815 95 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 CASP2P42575 452 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 CLCN4P51793 760 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 ATP12AP54707 1039 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 RAB10P61026 200 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 FGL1Q08830 312 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 SGCAQ16586 387 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 PYDC2Q56P42 97 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 RTP2Q5QGT7 225 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 ANKRD34AQ69YU3 496 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 SMYD5Q6GMV2 418 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 GALNT5Q7Z7M9 940 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 SLC22A9Q8IVM8 553 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 TTC29Q8NA56 475 aaPredicted RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 CEP76Q8TAP6 659 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 HTR3CQ8WXA8 447 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 MTERF3Q96E29 417 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 EXOC2Q96KP1 924 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF285Q96NJ3 590 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 COL21A1Q96P44 957 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 PEBP4Q96S96 227 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF670Q9BS34 389 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 NT5DC2Q9H857 520 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 AASSQ9UDR5 926 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 PURGQ9UJV8 347 aaKnown RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 NDRG4Q9ULP0 352 aaKnown RBP8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 INVSQ9Y283 1065 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
SRGAP1-202ENST00000537556 NAV1Q8NEY1 1877 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 INMT-MINDY4F8WBC2 141 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 HNRNPDLO14979 420 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ANXA3P12429 323 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 PSMD4P55036 377 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 EEF1A1P68104 462 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 EEF1A2Q05639 463 aaKnown RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 DMP1Q13316 513 aaPredicted RBP8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 RCAN2Q14206 197 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 EMC2Q15006 297 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ZNF284Q2VY69 593 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 EEF1A1P5Q5VTE0 462 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 KIAA1614Q5VZ46 1190 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 LRRC66Q68CR7 880 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 GPR155Q7Z3F1 870 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 NIM1KQ8IY84 436 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ACVR1CQ8NER5 493 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 FBXO30Q8TB52 745 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 NANPQ8TBE9 248 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 SENP8Q96LD8 212 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 PDCD10Q9BUL8 212 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 RASSF1Q9NS23 344 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 ABCC13Q9NSE7 274 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 BABAM2Q9NXR7 383 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 NLKQ9UBE8 527 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 LIMD1Q9UGP4 676 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 FBXO10Q9UK96 956 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 MINPP1Q9UNW1 487 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 CLCA3PQ9Y6N3 262 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 SLX4Q8IY92 1834 aa8.31□□□□□ -1.08
SRGAP1-202ENST00000537556 IQCMA0A1B0GVH7 501 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms