RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MFAP4P55083 255 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 FCHO2Q0JRZ9 810 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 CDH18Q13634 790 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 NR1D2Q14995 579 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 ZFAND4Q86XD8 727 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 DHX58Q96C10 678 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 NEK1Q96PY6 1258 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 SEPT11Q9NVA2 429 aaKnown RBP3.84□□□□□ -1.79
CCDC7-208ENST00000537047 ZNF148Q9UQR1 794 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 WIPI2Q9Y4P8 454 aa3.84□□□□□ -1.79
CCDC7-208ENST00000537047 ATRXP46100 2492 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 ZNF840PA6NDX5 716 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 TMEM221A6NGB7 291 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 B4E171 279 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 TFECO14948 347 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-208ENST00000537047 PAPSS1O43252 624 aaPredicted RBP3.83□□□□□ -1.8
CCDC7-208ENST00000537047 PRAMEF11O60813 436 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 VPREB1P12018 145 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 KLK2P20151 261 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 TSPAN7P41732 249 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 SIRPAP78324 504 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 NDPQ00604 133 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 SYT14P1Q58G82 188 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 SLC35D3Q5M8T2 416 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 VITQ6UXI7 678 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 LEKR1Q6ZMV7 388 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 CEP57Q86XR8 500 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 NPRL2Q8WTW4 380 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 PIGBQ92521 554 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 LGMNQ99538 433 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 GKN1Q9NS71 199 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 TMED3Q9Y3Q3 217 aa3.83□□□□□ -1.8
CCDC7-208ENST00000537047 TDRD9Q8NDG6 1382 aaKnown RBP3.83□□□□□ -1.8
CCDC7-208ENST00000537047 IGKV6D-21A0A0A0MT36 114 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 RPL35AP18077 110 aaKnown RBP3.82□□□□□ -1.8
CCDC7-208ENST00000537047 CHMP24386 653 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 PIK3R1P27986 724 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 MAT1AQ00266 395 aaKnown RBP3.82□□□□□ -1.8
CCDC7-208ENST00000537047 SETQ01105 290 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-208ENST00000537047 MAMLD1Q13495 774 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 TMEM132DQ14C87 1099 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 UGT3A2Q3SY77 523 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 ALFQ53S48 1182 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 MMS22LQ6ZRQ5 1243 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 FGFRL1Q8N441 504 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 SSMEM1Q8WWF3 244 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 PGAP2Q9UHJ9 254 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 TRIM17Q9Y577 477 aa3.82□□□□□ -1.8
CCDC7-208ENST00000537047 ZNF541Q9H0D2 1346 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 HPP00738 406 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 ZBTB25P24278 435 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 ARHGAP22Q7Z5H3 698 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 ADGRF2Q8IZF7 708 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 SLC37A3Q8NCC5 494 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 NAXEQ8NCW5 288 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 CYYR1Q96J86 154 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 CNOT6LQ96LI5 555 aaKnown RBP3.81□□□□□ -1.8
CCDC7-208ENST00000537047 PPM1MQ96MI6 270 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 CDRT15Q96T59 188 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 HOXD1Q9GZZ0 328 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 FAM49AQ9H0Q0 323 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-208ENST00000537047 ADNPQ9H2P0 1102 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 PARLQ9H300 379 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 B4GALT7Q9UBV7 327 aa3.81□□□□□ -1.8
CCDC7-208ENST00000537047 SEC63Q9UGP8 760 aaKnown RBP3.81□□□□□ -1.8
CCDC7-208ENST00000537047 IGHV4-30-2A0A087WSY4 118 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 NPIPB9F8W1W9 429 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 CD4P01730 458 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 IRX4P78413 519 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 MPP1Q00013 466 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 RNASEH2BQ5TBB1 312 aaKnown RBP3.8□□□□□ -1.8
CCDC7-208ENST00000537047 FAM166AQ6J272 317 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 NOTUMQ6P988 496 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 NUDT13Q86X67 352 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 MMD2Q8IY49 270 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 GPD1LQ8N335 351 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 SAT2Q96F10 170 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-208ENST00000537047 LINC00167Q96N53 147 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 PAFAH2Q99487 392 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 LPAR4Q99677 370 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 WNT5BQ9H1J7 359 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 GPN1Q9HCN4 374 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-208ENST00000537047 VSIG4Q9Y279 399 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 R4GN57 208 aa3.8□□□□□ -1.8
CCDC7-208ENST00000537047 A0A087WWV3 80 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 MEIS2O14770 477 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 TEX28O15482 410 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 TOMM70O94826 608 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 MAN1A1P33908 653 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 SLC9A3P48764 834 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 ARSEP51690 589 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 POU5F1Q01860 360 aaKnown RBP3.79□□□□□ -1.8
CCDC7-208ENST00000537047 ITGA7Q13683 1181 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 TAB1Q15750 504 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 LCLAT1Q6UWP7 414 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 CDHR3Q6ZTQ4 885 aa3.79□□□□□ -1.8
CCDC7-208ENST00000537047 TMEM173Q86WV6 379 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms