RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 CTBSQ01459 385 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 RING1Q06587 406 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ARHGAP1Q07960 439 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 RBBP4Q09028 425 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 EIF4EBP2Q13542 120 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 GRB7Q14451 532 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZNF235Q14590 738 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 MAD2L1BPQ15013 274 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 SUZ12Q15022 739 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 TRIP4Q15650 581 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 MEP1AQ16819 746 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZIK1Q3SY52 487 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 HSD17B12Q53GQ0 312 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 TCEAL5Q5H9L2 206 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ANXA8L1Q5VT79 327 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 HACD4Q5VWC8 232 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 SYPL2Q5VXT5 272 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CPZQ66K79 652 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 LRRC66Q68CR7 880 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 KDM4DQ6B0I6 523 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ALG1LQ6GMV1 187 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CCSAPQ6IQ19 270 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 NEK5Q6P3R8 708 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 IL27RAQ6UWB1 636 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CCBE1Q6UXH8 406 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 HSDL2Q6YN16 418 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZNF783Q6ZMS7 281 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 OTOP3Q7RTS5 596 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 MILR1Q7Z6M3 343 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 RNF130Q86XS8 419 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZDHHC21Q8IVQ6 265 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CACTIN-AS1Q8N1I8 211 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 RYBPQ8N488 228 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 NPWQ8N729 165 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CDYL2Q8N8U2 506 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ATG16L2Q8NAA4 619 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZNF548Q8NEK5 533 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZFP90Q8TF47 636 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CLEC4CQ8WTT0 213 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 SLC22A17Q8WUG5 538 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 RPL3LQ92901 407 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 FUBP1Q96AE4 644 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 ULK4Q96C45 1275 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CXorf40BQ96DE9 158 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 MRPL38Q96DV4 380 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 ASIC4Q96FT7 647 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 HRASLS5Q96KN8 279 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 C3orf30Q96M34 536 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 RIPOR3Q96MK2 946 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 WDFY2Q96P53 400 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 TRNT1Q96Q11 434 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 OR52E6Q96RD3 313 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 APOL2Q9BQE5 337 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 SLC39A3Q9BRY0 314 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 COPS4Q9BT78 406 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 NTMT1Q9BV86 223 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 EMILIN2Q9BXX0 1053 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 GABARAPL3Q9BY60 117 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 FAM126AQ9BYI3 521 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 SLC39A8Q9C0K1 460 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 MUC3BQ9H195 1237 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 MAGEH1Q9H213 219 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ABHD16BQ9H3Z7 469 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 DPEP3Q9H4B8 488 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 NIPAL2Q9H841 368 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 AGO3Q9H9G7 860 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 ABCB10Q9NRK6 738 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 FAM120CQ9NX05 1096 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 DLL3Q9NYJ7 618 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 EHD3Q9NZN3 535 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 PCTPQ9UKL6 214 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 SNX7Q9UNH6 387 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 POFUT2Q9Y2G5 429 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 Q9Y3F1 56 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 PCDHGB6Q9Y5F9 930 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 PCDHGA10Q9Y5H3 936 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZNF236Q9UL36 1845 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 SMCHD1A6NHR9 2005 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 PARP14Q460N5 1801 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 IGLV3-10A0A075B6K4 115 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CXorf51AA0A1B0GTR3 108 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 MBLAC1A4D2B0 266 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 SLC35F4A4IF30 521 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 NEMP2A6NFY4 417 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 NOTOA8MTQ0 251 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 B8ZZF3 427 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 E9PAM4 449 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 FAM72CH0Y354 149 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CCRL2O00421 344 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 BTN3A1O00481 513 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 SPTLC1O15269 473 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 MBTPS2O43462 519 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 LDB2O43679 373 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 DUSP11O75319 330 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 PAGE1O75459 146 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ECI2O75521 394 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 MT-CYBP00156 380 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 GLUD1P00367 558 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 GOT2P00505 430 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 SLC4A1P02730 911 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms