RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 GK3PQ14409 553 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PDCD4Q53EL6 469 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MTX3Q5HYI7 312 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 INTS11Q5TA45 600 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PNCKQ6P2M8 343 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CYP2R1Q6VVX0 501 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LILRA3Q8N6C8 439 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MFSD2AQ8NA29 543 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CANT1Q8WVQ1 401 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LZICQ8WZA0 190 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CLDN23Q96B33 292 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TOE1Q96GM8 510 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PDLIM5Q96HC4 596 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC45A3Q96JT2 553 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC39A3Q9BRY0 314 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ITM2CQ9NQX7 267 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CMTM6Q9NX76 183 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TRMT6Q9UJA5 497 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZNF225Q9UK10 706 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TMEM98Q9Y2Y6 226 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RNF11Q9Y3C5 154 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SIT1Q9Y3P8 196 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PRKAB1Q9Y478 270 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SNX13Q9Y5W8 968 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 A0A1B0GTL3 188 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MSH3P20585 1137 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GRIA3P42263 894 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NR1H2P55055 460 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CDK3Q00526 305 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BOP1Q14137 746 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RCAN2Q14206 197 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PLA2G4EQ3MJ16 856 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CRTC3Q6UUV7 619 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MACC1Q6ZN28 852 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SYVN1Q86TM6 617 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PTRH1Q86Y79 214 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 HOMEZQ8IX15 550 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CHCHD4Q8N4Q1 142 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 OR56A4Q8NGH8 313 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 EEF1AKMT1Q8WVE0 214 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LINGO1Q96FE5 620 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC29A1Q99808 456 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SEMA6AQ9H2E6 1030 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SEMA4BQ9NPR2 832 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 C8orf4Q9NR00 106 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DNAAF2Q9NVR5 837 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CHCHD3Q9NX63 227 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZIM2Q9NZV7 527 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GIMAP2Q9UG22 337 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ST14Q9Y5Y6 855 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLCO1B1Q9Y6L6 691 aa12.6□□□□□ -0.39
CDK5RAP3-202ENST00000536708 FANCMQ8IYD8 2048 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DYTNA2CJ06 578 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NPEPPSL1A6NEC2 478 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZNF839A8K0R7 811 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ATG13O75143 517 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 EEDO75530 441 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CHEK2O96017 543 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NPPAP01160 153 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CCR7P32248 378 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 HK3P52790 923 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 IL2P60568 153 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DMWDQ09019 674 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TMEM115Q12893 351 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SGCGQ13326 291 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 AGERQ15109 404 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RPS6KA2Q15349 733 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NHSL2Q5HYW2 709 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LDLRAP1Q5SW96 308 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 UGT3A1Q6NUS8 523 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 AMIGO2Q86SJ2 522 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TMEM125Q96AQ2 219 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZNF382Q96SR6 550 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NELL2Q99435 816 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PRPF18Q99633 342 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GPR174Q9BXC1 333 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ANKRD60Q9BZ19 345 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 WDR26Q9H7D7 661 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CAAP1Q9H8G2 361 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NOL11Q9H8H0 719 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BTRCQ9Y297 605 aa12.59□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TDRD6O60522 2096 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 POM121BA6NF01 834 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 BTN3A1O00481 513 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 E2F3O00716 465 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 SCAMP1O15126 338 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 CRCPO75575 148 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 IGLV3-19P01714 112 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 IGHV4-34P06331 123 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 GPIP06744 558 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ZNF8P17098 575 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 IL10P22301 178 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 DIO3P55073 304 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 ERVK-8P63133 956 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 FXNQ16595 210 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 NRF1Q16656 503 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 TPRG1LQ5T0D9 272 aa12.58□□□□□ -0.4
CDK5RAP3-202ENST00000536708 IYDQ6PHW0 289 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms