RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SUN3Q8TAQ9 357 aa12.41□□□□□ -0.42
TNFRSF1A-207ENST00000535958 HDAC10Q969S8 669 aa12.41□□□□□ -0.42
TNFRSF1A-207ENST00000535958 FOPNLQ96NB1 174 aa12.41□□□□□ -0.42
TNFRSF1A-207ENST00000535958 LMF1Q96S06 567 aa12.41□□□□□ -0.42
TNFRSF1A-207ENST00000535958 SLX1AQ9BQ83 275 aa12.41□□□□□ -0.42
TNFRSF1A-207ENST00000535958 YIPF2Q9BWQ6 316 aa12.41□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■■■□□ 14.9
TNFRSF1A-207ENST00000535958 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
TNFRSF1A-207ENST00000535958 C3orf18Q9UK00 162 aa12.41□□□□□ -0.42
TNFRSF1A-207ENST00000535958 TRAV17A0A0B4J275 112 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 HYKKA2RU49 373 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 MROH6A6NGR9 719 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ERI2A8K979 691 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 VPS26AO75436 327 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 STSP08842 583 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CCR7P32248 378 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 GCGRP47871 477 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 AP2B1P63010 937 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 KLC1Q07866 573 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 MUM1Q2TAK8 710 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 WASHC2DQ5SRD0 308 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PTRHD1Q6GMV3 140 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 RPUSD3Q6P087 351 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 AADACL2Q6P093 401 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 GFRALQ6UXV0 394 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 TMEM151BQ8IW70 566 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 RNF214Q8ND24 703 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 OR52K1Q8NGK4 314 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 OR4L1Q8NH43 312 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 STT3BQ8TCJ2 826 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ZUFSPQ96AP4 578 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 RAD51AP1Q96B01 352 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CABS1Q96KC9 395 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PANX3Q96QZ0 392 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 CARD6Q9BX69 1037 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 UNKQ9C0B0 810 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 PTGFRNQ9P2B2 879 aa12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 ZC3H7BQ9UGR2 993 aaKnown RBP12.4□□□□□ -0.42
TNFRSF1A-207ENST00000535958 SVILO95425 2214 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 DOCK10Q96BY6 2186 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TRGV8A0A0C4DH27 118 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 A0A0J9YVX5 310 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 FITM1A5D6W6 292 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TARM1B6A8C7 271 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 WFS1O76024 890 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ONECUT2O95948 504 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ZGLP1P0C6A0 271 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MYBL2P10244 700 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CASP6P55212 293 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RBPJQ06330 500 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TSTD2Q5T7W7 516 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MTFR2Q6P444 385 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PEX26Q7Z412 305 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 VRK3Q8IV63 474 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 OTUD6BQ8N6M0 293 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PPHLN1Q8NEY8 458 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 OR13J1Q8NGT2 312 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 C8orf44Q96CB5 159 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MIPEPQ99797 713 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TMEM121Q9BTD3 319 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TRIM5Q9C035 493 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CATSPERZQ9NTU4 200 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 RIC8BQ9NVN3 520 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 GNPTGQ9UJJ9 305 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CDC14AQ9UNH5 594 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MRPS2Q9Y399 296 aaKnown RBP12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CSMD1Q96PZ7 3565 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 LRBAP50851 2863 aa12.39□□□□□ -0.43
TNFRSF1A-207ENST00000535958 VSTM2BA6NLU5 285 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 PRMT5O14744 637 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 KPNA5O15131 536 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 KLHL18O94889 574 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CRYABP02511 175 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ANXA5P08758 320 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ADRA1DP25100 572 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CMPK1P30085 196 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 FDFT1P37268 417 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CCNFP41002 786 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 BDKRB1P46663 353 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TTPAP49638 278 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 GDF10P55107 478 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 KCNK10P57789 538 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 EEF1A2Q05639 463 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TBX2Q13207 712 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ZXDCQ2QGD7 858 aaPredicted RBP12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 NDUFAF7Q7L592 441 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 OTOAQ7RTW8 1153 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 GDF7Q7Z4P5 450 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SYCE1Q8N0S2 351 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 SIRT6Q8N6T7 355 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 TC2NQ8N9U0 490 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 LMNTD1Q8N9Z9 388 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 CATSPER1Q8NEC5 780 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 BRIX1Q8TDN6 353 aaKnown RBP12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 NR4A3Q92570 626 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 ALG3Q92685 438 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 MENTQ9BUN1 341 aa12.38□□□□□ -0.43
TNFRSF1A-207ENST00000535958 C14orf105Q9NVL8 296 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms