RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	ZFPM2	Q8WW38	1151 aa		13.7	□□□□□ -0.22
POLE-208	ENST00000535934	ARHGAP9	Q9BRR9	750 aa		13.7	□□□□□ -0.22
POLE-208	ENST00000535934	BTBD10	Q9BSF8	475 aa		13.7	□□□□□ -0.22
POLE-208	ENST00000535934	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.7	□□□□□ -0.22
POLE-208	ENST00000535934	SSU72	Q9NP77	194 aa	Known RBP	13.7	□□□□□ -0.22
POLE-208	ENST00000535934	STARD5	Q9NSY2	213 aa		13.7	□□□□□ -0.22
POLE-208	ENST00000535934	ZFP69B	Q9UJL9	534 aa		13.7	□□□□□ -0.22
POLE-208	ENST00000535934	HAO1	Q9UJM8	370 aa		13.7	□□□□□ -0.22
POLE-208	ENST00000535934	PSMD3	O43242	534 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	CPA3	P15088	417 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	POLR2C	P19387	275 aa	Predicted RBP	13.69	□□□□□ -0.22
POLE-208	ENST00000535934	MGAT5	Q09328	741 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	MYBPC3	Q14896	1274 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	PDK4	Q16654	411 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	CNPY1	Q3B7I2	92 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
POLE-208	ENST00000535934	LIN52	Q52LA3	116 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	KLC3	Q6P597	504 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.69	□□□□□ -0.22
POLE-208	ENST00000535934	NAPRT	Q6XQN6	538 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	TDRP	Q86YL5	185 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	RASGRP3	Q8IV61	690 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	HEXDC	Q8WVB3	486 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	HDAC10	Q969S8	669 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	SMC6	Q96SB8	1091 aa		13.69	□□□□□ -0.22
POLE-208	ENST00000535934	TRIT1	Q9H3H1	467 aa	Known RBP	13.69	□□□□□ -0.22
POLE-208	ENST00000535934	HECTD1	Q9ULT8	2610 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	TLCD2	A6NGC4	264 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	ZNF891	A8MT65	544 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	BTN3A3	O00478	584 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	OR1I1	O60431	355 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	EDF1	O60869	148 aa	Known RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	PSMG1	O95456	288 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	PABPC4L	P0CB38	370 aa	Known RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	PIM1	P11309	404 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	TPP2	P29144	1249 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	RPL22	P35268	128 aa	Known RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	CDH17	Q12864	832 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	TUBB3	Q13509	450 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	SEMA5A	Q13591	1074 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	KRT72	Q14CN4	511 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	RCN1	Q15293	331 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	CGB2	Q6NT52	195 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	KLHL35	Q6PF15	583 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	LINC00523	Q86TU6	105 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	PPP1R3B	Q86XI6	285 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	D2HGDH	Q8N465	521 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	ESX1	Q8N693	406 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	PRELID2	Q8N945	189 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	DNAAF3	Q8N9W5	541 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	SIDT2	Q8NBJ9	832 aa	Known RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	STARD8	Q92502	1023 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	MCUR1	Q96AQ8	359 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	SNF8	Q96H20	258 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	CATSPER2	Q96P56	530 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	XKR8	Q9H6D3	395 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	LRRC4C	Q9HCJ2	640 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	CASS4	Q9NQ75	786 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	RAB6B	Q9NRW1	208 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	FGF21	Q9NSA1	209 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	CROT	Q9UKG9	612 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	BLOC1S6	Q9UL45	172 aa		13.68	□□□□□ -0.22
POLE-208	ENST00000535934	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	UBR5	O95071	2799 aa	Predicted RBP	13.68	□□□□□ -0.22
POLE-208	ENST00000535934	ERI2	A8K979	691 aa	Known RBP	13.67	□□□□□ -0.22
POLE-208	ENST00000535934	NTRK1	P04629	796 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	LYN	P07948	512 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	FURIN	P09958	794 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	FDFT1	P37268	417 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	HSD11B2	P80365	405 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	CDC20	Q12834	499 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	PRKG2	Q13237	762 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	SEMA3A	Q14563	771 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	GPR19	Q15760	415 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	LONRF1	Q17RB8	773 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	HSP90AA5P	Q58FG0	334 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	TSTD2	Q5T7W7	516 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	PRAMEF17	Q5VTA0	474 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	FAM91A1	Q658Y4	838 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	BORA	Q6PGQ7	559 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	ZNF534	Q76KX8	674 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	OOSP2	Q86WS3	158 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	SLC38A9	Q8NBW4	561 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	ACVR1C	Q8NER5	493 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	FERD3L	Q96RJ6	166 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.67	□□□□□ -0.22
POLE-208	ENST00000535934	PHACTR1	Q9C0D0	580 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	GALNT8	Q9NY28	637 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	COLEC10	Q9Y6Z7	277 aa		13.67	□□□□□ -0.22
POLE-208	ENST00000535934	UBA6	A0AVT1	1052 aa	Predicted RBP	13.66	□□□□□ -0.22
POLE-208	ENST00000535934	SLC9B1P1	A6NJY1	282 aa		13.66	□□□□□ -0.22
POLE-208	ENST00000535934	BTN3A1	O00481	513 aa		13.66	□□□□□ -0.22
POLE-208	ENST00000535934	GOT2	P00505	430 aa	Known RBP	13.66	□□□□□ -0.22
POLE-208	ENST00000535934	APRT	P07741	180 aa		13.66	□□□□□ -0.22
POLE-208	ENST00000535934	DLST	P36957	453 aa		13.66	□□□□□ -0.22
POLE-208	ENST00000535934	KCNJ1	P48048	391 aa		13.66	□□□□□ -0.22
POLE-208	ENST00000535934	ACVR1	Q04771	509 aa		13.66	□□□□□ -0.22
POLE-208	ENST00000535934	KRT33B	Q14525	404 aa		13.66	□□□□□ -0.22
POLE-208	ENST00000535934	CCNG2	Q16589	344 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms