RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 KMT5CQ86Y97 462 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 GPSM1Q86YR5 675 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 CYP4X1Q8N118 509 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 GATA6Q92908 595 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 FBXL8Q96CD0 374 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 MIPEPQ99797 713 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 ACAT2Q9BWD1 397 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 ATG10Q9H0Y0 220 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 ZNF358Q9NW07 568 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 PISDQ9UG56 409 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 PLAAQ9Y263 795 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 BTRCQ9Y297 605 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 KLHL20Q9Y2M5 609 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 PCDHGA8Q9Y5G5 932 aa11.63□□□□□ -0.55
CHD4-203ENST00000535717 TLDC2A0PJX2 215 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 CCDC151A5D8V7 595 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 B4E171 279 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 CDH16O75309 829 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 TNFSF15O95150 251 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 EBLN1P0CF75 366 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 COL6A2P12110 1019 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 FOLR1P15328 257 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 MAGP20916 626 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 TSPAN7P41732 249 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 GLRBP48167 497 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 ARL4DP49703 201 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 MAPK10P53779 464 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 TBPL1P62380 186 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 MC2RQ01718 297 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 IFFO1Q0D2I5 559 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 NAE1Q13564 534 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 ACAP2Q15057 778 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 KIAA1614Q5VZ46 1190 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 CLEC14AQ86T13 490 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 D2HGDHQ8N465 521 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 C19orf47Q8N9M1 422 aaKnown RBP11.62□□□□□ -0.55
CHD4-203ENST00000535717 OR2L3Q8NG85 312 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 STAG3L4Q8TBR4 150 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 ATL1Q8WXF7 558 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 PMEPA1Q969W9 287 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 RHBDF1Q96CC6 855 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 NXPE2Q96DL1 559 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 MED8Q96G25 268 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 SLC46A1Q96NT5 459 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 ATOH8Q96SQ7 321 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 EGFL8Q99944 293 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 SGPP1Q9BX95 441 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 TMEM121BQ9BXQ6 578 aaPredicted RBP11.62□□□□□ -0.55
CHD4-203ENST00000535717 FAM60AQ9NP50 221 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 CCDC177Q9NQR7 707 aaPredicted RBP11.62□□□□□ -0.55
CHD4-203ENST00000535717 ABCF3Q9NUQ8 709 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 PCMTD2Q9NV79 361 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 SOHLH2Q9NX45 425 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 TAC3Q9UHF0 121 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 RNF112Q9ULX5 631 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 PCDHB11Q9Y5F2 797 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 AK5Q9Y6K8 562 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 ADAMTS20P59510 1910 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 PCM1Q15154 2024 aa11.62□□□□□ -0.55
CHD4-203ENST00000535717 DMXL2Q8TDJ6 3036 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 A0A1W2PPM1 405 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 NCF1BA6NI72 391 aaPredicted RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 NCF1CA8MVU1 366 aaPredicted RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 GOLGA8RI6L899 631 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 BRINP1O60477 761 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 KERAO60938 352 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 ERLIN1O75477 346 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 FKBP9O95302 570 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 MT-ND3P03897 115 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 ANXA5P08758 320 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 PYGBP11216 843 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 NCF1P14598 390 aaPredicted RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 CMPK1P30085 196 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 GRIA3P42263 894 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 FOXK2Q01167 660 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 GPR19Q15760 415 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 C18orf21Q32NC0 220 aaPredicted RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 CDKL4Q5MAI5 379 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 BEND6Q5SZJ8 279 aaPredicted RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 THEMIS2Q5TEJ8 643 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 ICE2Q659A1 982 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 FCRL6Q6DN72 434 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 IGF2-ASQ6U949 168 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 CDHR3Q6ZTQ4 885 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 IQCKQ8N0W5 287 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 CNPY4Q8N129 248 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 OR56A3Q8NH54 315 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 RHEBL1Q8TAI7 183 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 ACMSDQ8TDX5 336 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 USP7Q93009 1102 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 EXT2Q93063 718 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 ALKBH8Q96BT7 664 aaKnown RBP11.61□□□□□ -0.55
CHD4-203ENST00000535717 PYCR2Q96C36 320 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 TCTN2Q96GX1 697 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 CABS1Q96KC9 395 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 OR6C1Q96RD1 312 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 CTRCQ99895 268 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 TMEM109Q9BVC6 243 aa11.61□□□□□ -0.55
CHD4-203ENST00000535717 ROPN1BQ9BZX4 212 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms