RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 HNRNPRO43390 633 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 CTSVO60911 334 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 USP1O94782 785 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 MATN4O95460 622 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 GOT2P00505 430 aaKnown RBP10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 APOA4P06727 396 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 TTPAP49638 278 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 TDGF1P3P51864 188 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 Q0VFX4 171 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 ART3Q13508 389 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 RAPSNQ13702 412 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 ARHGAP19Q14CB8 494 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 PRTGQ2VWP7 1150 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 GARNL3Q5VVW2 1013 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 DRICH1Q6PGQ1 229 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 VRK3Q8IV63 474 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 TMEM151BQ8IW70 566 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 UBL4BQ8N7F7 174 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 DNAJB14Q8TBM8 379 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 GRHL3Q8TE85 626 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 TMEM121Q9BTD3 319 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 TSPY26PQ9H489 355 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 EPS8L2Q9H6S3 715 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 SPATA7Q9P0W8 599 aa10.72□□□□□ -0.69
CLSTN3-206ENST00000535668 ADGRG4Q8IZF6 3080 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 CSMD2Q7Z408 3487 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 A1L4Q6 167 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 C1orf105O95561 183 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 GAS8O95995 478 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 SERPINA7P05543 415 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 ALAS2P22557 587 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 TNFSF10P50591 281 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 AP2B1P63010 937 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 HSPA14Q0VDF9 509 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 DSG2Q14126 1118 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 SYTL3Q4VX76 610 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 AADACL2Q6P093 401 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 C4orf22Q6V702 233 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 NDUFAF7Q7L592 441 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 PCGF5Q86SE9 256 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 RNF10Q8N5U6 811 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 BCORP1Q8N888 145 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 TTC29Q8NA56 475 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 FBXO15Q8NCQ5 510 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 OR2L3Q8NG85 312 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 OR52K1Q8NGK4 314 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 STT3BQ8TCJ2 826 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 MAGEC3Q8TD91 643 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 ZNF778Q96MU6 729 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 PANX3Q96QZ0 392 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 TCF12Q99081 682 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 SELENOSQ9BQE4 189 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 ETNK1Q9HBU6 452 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 KLHL42Q9P2K6 505 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 CTSFQ9UBX1 484 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 ZNF282Q9UDV7 671 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 CDC23Q9UJX2 597 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 AMFRQ9UKV5 643 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 R3HDM2Q9Y2K5 976 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 TDRKHQ9Y2W6 561 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 TCAF1Q9Y4C2 921 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 CSAG2Q9Y5P2 127 aa10.71□□□□□ -0.69
CLSTN3-206ENST00000535668 TRAV17A0A0B4J275 112 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 MACROD2A1Z1Q3 448 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 HYKKA2RU49 373 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 OR51F1A6NGY5 319 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 LRRTM2O43300 516 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 LIASO43766 372 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 IPO7O95373 1038 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 ZGLP1P0C6A0 271 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 AGAP20933 346 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 COL8A1P27658 744 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 TNFRSF8P28908 595 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 HSD17B2P37059 387 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 SLC26A3P40879 764 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 GLRBP48167 497 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 CDK16Q00536 496 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 KLC1Q07866 573 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 FAM53BQ14153 422 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 SEMA3AQ14563 771 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 SF1Q15637 639 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 MUM1Q2TAK8 710 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 FASTKD1Q53R41 847 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 PCID2Q5JVF3 399 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 WASHC2DQ5SRD0 308 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 IRAK1BP1Q5VVH5 260 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 FBXO42Q6P3S6 717 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 TMEM205Q6UW68 189 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 PEX26Q7Z412 305 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 TXLNBQ8N3L3 684 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 DNAJB8Q8NHS0 232 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 BIRC8Q96P09 236 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 FAM118BQ9BPY3 351 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 IL22Q9GZX6 179 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 ZNF304Q9HCX3 659 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 C14orf105Q9NVL8 296 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 ABI3Q9P2A4 366 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 SLC2A6Q9UGQ3 507 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 CDC14AQ9UNH5 594 aa10.7□□□□□ -0.7
CLSTN3-206ENST00000535668 MRPS2Q9Y399 296 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms