RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 SLC7A1P30825 629 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 KCNC1P48547 511 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 PPP5CP53041 499 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ITKQ08881 620 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 PLEKHG6Q3KR16 790 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 TMEM215Q68D42 235 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 STRA8Q7Z7C7 330 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 PIM3Q86V86 326 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 OR2T34Q8NGX1 318 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 RPL3LQ92901 407 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 MMP28Q9H239 520 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 MRPL17Q9NRX2 175 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 EVA1BQ9NVM1 165 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 PLXNB3Q9ULL4 1909 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 DOCK9Q9BZ29 2069 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ASPMQ8IZT6 3477 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 CIB4A0PJX0 185 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 KLF11O14901 512 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 SGTAO43765 313 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 SSX4O60224 188 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 RAMP2O60895 175 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ATP5BP06576 529 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 INHBBP09529 407 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 MBL2P11226 248 aaPredicted RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 CR2P20023 1033 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 HTR1BP28222 390 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 KPNA2P52292 529 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 IL18R1Q13478 541 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 GALEQ14376 348 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 LINC00523Q86TU6 105 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 SVOPQ8N4V2 548 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 DNAJB14Q8TBM8 379 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ENKURQ8TC29 256 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ING5Q8WYH8 240 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 ZUFSPQ96AP4 578 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 TESCQ96BS2 214 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 TRMT2BQ96GJ1 504 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 SORBS1Q9BX66 1292 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 MTG2Q9H4K7 406 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 SPAG4Q9NPE6 437 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 AASSQ9UDR5 926 aa8.82□□□□□ -1
SF3B2-216ENST00000534765 EIF3LQ9Y262 564 aaKnown RBP8.82□□□□□ -1
SF3B2-216ENST00000534765 TMEM233B4DJY2 109 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CBX4O00257 560 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 NCAM2O15394 837 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 AKR7A2O43488 359 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CRCPO75575 148 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 URODP06132 367 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ZNF806P0C7X5 589 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TSPAN8P19075 237 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 KELP23276 732 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CBX5P45973 191 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 POLD2P49005 469 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SCRN3Q0VDG4 424 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 PCLAFQ15004 111 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SETMARQ53H47 684 aaPredicted RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 SAMD4BQ5PRF9 694 aaKnown RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 TPRG1LQ5T0D9 272 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TSTD2Q5T7W7 516 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 RNF219Q5W0B1 726 aaPredicted RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 NOXA1Q86UR1 476 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 KCNMB4Q86W47 210 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SLC41A1Q8IVJ1 513 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CENPLQ8N0S6 344 aaPredicted RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 CHCHD4Q8N4Q1 142 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SP7Q8TDD2 431 aaPredicted RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 SPON2Q9BUD6 331 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SNX15Q9NRS6 342 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 MBD1Q9UIS9 605 aaPredicted RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 EDARQ9UNE0 448 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 PDE10AQ9Y233 779 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TCAF1Q9Y4C2 921 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 LOC285095A0A1B0GVY8 99 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 MAGEB16A2A368 324 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TEX46H3BTG2 121 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SCO2O43819 266 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TBL1XO60907 577 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 UPK1BO75841 260 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 FGBP02675 491 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 C8BP07358 591 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CA3P07451 260 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 RPS3P23396 243 aaKnown RBP eCLIP8.81□□□□□ -1
SF3B2-216ENST00000534765 GRK3P35626 688 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 HNF1BP35680 557 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CSKP41240 450 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 MAGEA12P43365 314 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 LRRC73Q5JTD7 316 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ZNF549Q6P9A3 640 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TMEM199Q8N511 208 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 LMLNQ96KR4 655 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 EGLN2Q96KS0 407 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 CSF3RQ99062 836 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SEC22CQ9BRL7 303 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 ACE2Q9BYF1 805 aaPredicted RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 DCSTAMPQ9H295 470 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 SYTL2Q9HCH5 934 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 GLTPQ9NZD2 209 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 TRMT6Q9UJA5 497 aaKnown RBP8.81□□□□□ -1
SF3B2-216ENST00000534765 SLC39A10Q9ULF5 831 aa8.81□□□□□ -1
SF3B2-216ENST00000534765 MED16Q9Y2X0 877 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms