RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 GCGRP47871 477 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 SOX8P57073 446 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 VSX2P58304 361 aaPredicted RBP17.69■□□□□ 0.42
CTSB-233ENST00000534636 SARNPP82979 210 aaKnown RBP17.69■□□□□ 0.42
CTSB-233ENST00000534636 CDK16Q00536 496 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 MRPL49Q13405 166 aaKnown RBP17.69■□□□□ 0.42
CTSB-233ENST00000534636 ELOAQ14241 798 aaKnown RBP17.69■□□□□ 0.42
CTSB-233ENST00000534636 RBBP7Q16576 425 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 PLEKHN1Q494U1 663 aaPredicted RBP17.69■□□□□ 0.42
CTSB-233ENST00000534636 PRAMEF13Q5VWM6 474 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 SNRNP40Q96DI7 357 aaKnown RBP17.69■□□□□ 0.42
CTSB-233ENST00000534636 MIPEPQ99797 713 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 SLC26A1Q9H2B4 701 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 SLC22A11Q9NSA0 550 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 SYBUQ9NX95 663 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 PLEKHB1Q9UF11 243 aaPredicted RBP17.69■□□□□ 0.42
CTSB-233ENST00000534636 RUVBL2Q9Y230 463 aaKnown RBP17.69■□□□□ 0.42
CTSB-233ENST00000534636 NFS1Q9Y697 457 aa17.69■□□□□ 0.42
CTSB-233ENST00000534636 SEMA7AO75326 666 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 DDAH2O95865 285 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 TPSB2P20231 275 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 PSMB5P28074 263 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 ATP5DP30049 168 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 NR6A1Q15406 480 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 SIX1Q15475 284 aaPredicted RBP17.68■□□□□ 0.42
CTSB-233ENST00000534636 TPSAB1Q15661 275 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 NKG7Q16617 165 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 EIF2S3LQ2VIR3 472 aaKnown RBP17.68■□□□□ 0.42
CTSB-233ENST00000534636 TUBB8Q3ZCM7 444 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 DOPEY1Q5JWR5 2465 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 LRRC8BQ6P9F7 803 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 CISD2Q8N5K1 135 aaKnown RBP17.68■□□□□ 0.42
CTSB-233ENST00000534636 METTL27Q8N6F8 245 aaPredicted RBP17.68■□□□□ 0.42
CTSB-233ENST00000534636 OR2L3Q8NG85 312 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 HMGCLL1Q8TB92 370 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 MFSD3Q96ES6 412 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 KIFC1Q9BW19 673 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 SOX17Q9H6I2 414 aaPredicted RBP17.68■□□□□ 0.42
CTSB-233ENST00000534636 SLC6A20Q9NP91 592 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 LZTFL1Q9NQ48 299 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 SEMA3GQ9NS98 782 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 HOMER3Q9NSC5 361 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 TSR3Q9UJK0 312 aaKnown RBP17.68■□□□□ 0.42
CTSB-233ENST00000534636 VPS9D1Q9Y2B5 631 aa17.68■□□□□ 0.42
CTSB-233ENST00000534636 HEATR5BQ9P2D3 2071 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 HYKKA2RU49 373 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 FITM1A5D6W6 292 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 E5RI56 91 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 VPS26AO75436 327 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 ONECUT2O95948 504 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 ESR1P03372 595 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 CCDC175P0C221 793 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 CHRM3P20309 590 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 CMPK1P30085 196 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 FMO4P31512 558 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 OCA2Q04671 838 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 CTSL3PQ5NE16 218 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 WASHC2DQ5SRD0 308 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 AGAP7PQ5VUJ5 663 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 CASC4Q6P4E1 433 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 COX15Q7KZN9 410 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 TRIM58Q8NG06 486 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 COG1Q8WTW3 980 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 C19orf60Q96EN9 201 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 ZNF285Q96NJ3 590 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 AGAP4Q96P64 663 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 TCF12Q99081 682 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 SPSB2Q99619 263 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 WDR77Q9BQA1 342 aaPredicted RBP17.67■□□□□ 0.42
CTSB-233ENST00000534636 FAM114A2Q9NRY5 505 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 ASF1BQ9NVP2 202 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 SAMD15Q9P1V8 674 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 CTSFQ9UBX1 484 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 SOX13Q9UN79 622 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 MAU2Q9Y6X3 613 aa17.67■□□□□ 0.42
CTSB-233ENST00000534636 CENPEQ02224 2701 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 SVILO95425 2214 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 A0A0J9YVX5 310 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 GOLGA8KD6RF30 607 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 GOLGA8TH3BQL2 631 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 MASP2O00187 686 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 SOCS6O14544 535 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 PRICKLE3O43900 615 aaPredicted RBP17.66■□□□□ 0.42
CTSB-233ENST00000534636 CEP104O60308 925 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 CTSVO60911 334 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 EIF2S1P05198 315 aaKnown RBP17.66■□□□□ 0.42
CTSB-233ENST00000534636 OGNP20774 298 aaKnown RBP17.66■□□□□ 0.42
CTSB-233ENST00000534636 OR1D4P47884 311 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 GLRBP48167 497 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 CARSP49589 748 aaKnown RBP17.66■□□□□ 0.42
CTSB-233ENST00000534636 TYSND1Q2T9J0 566 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 ARMC3Q5W041 872 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 PRMT9Q6P2P2 845 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 CES3Q6UWW8 571 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 SHISA6Q6ZSJ9 500 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.66■□□□□ 0.42
CTSB-233ENST00000534636 LPGAT1Q92604 370 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 FAM136AQ96C01 138 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 BIRC8Q96P09 236 aa17.66■□□□□ 0.42
CTSB-233ENST00000534636 ZFYVE21Q9BQ24 234 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms