RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 TRBV5-3A0A0A0MS03 114 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 SERTM1A2A2V5 107 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 PLOD2O00469 737 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 DLGAP1O14490 977 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 MMP20O60882 483 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 CDH1P12830 882 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 FSHRP23945 695 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 ELP6Q0PNE2 266 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 DDX39BQ13838 428 aaKnown RBP13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 DOC2AQ14183 400 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 EIF4HQ15056 248 aaKnown RBP13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 PYCR3Q53H96 274 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 C9orf50Q5SZB4 431 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 ANKRD46Q86W74 232 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 TRAPPC5Q8IUR0 188 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 GFM2Q969S9 779 aaKnown RBP13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 RNF145Q96MT1 663 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 FOPNLQ96NB1 174 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 CCDC115Q96NT0 180 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 C9orf16Q9BUW7 83 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 CHID1Q9BWS9 393 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 EBPLQ9BY08 206 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 PAIP1Q9H074 479 aaKnown RBP13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 PCDHB14Q9Y5E9 798 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 COL4A3Q01955 1670 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 H3BM21 787 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 ACOX3O15254 700 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 LILRB5O75023 590 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 LDLRP01130 860 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 GPR1P46091 355 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 POLE2P56282 527 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 ERVK-21P61565 698 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 DUSP6Q16828 381 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 BCL7AQ4VC05 210 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 NOXRED1Q6NXP6 359 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 SPRED1Q7Z699 444 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 PHACTR4Q8IZ21 702 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 FAM9CQ8IZT9 166 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 MFSD2AQ8NA29 543 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 TERB1Q8NA31 727 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 OR56A3Q8NH54 315 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 WDR20Q8TBZ3 569 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 FIG4Q92562 907 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 AURKBQ96GD4 344 aaPredicted RBP13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 MTERF1Q99551 399 aaKnown RBP13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 PRPF18Q99633 342 aaKnown RBP13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 INPP5KQ9BT40 448 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 TBCDQ9BTW9 1192 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 TMEM245Q9H330 911 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 SFXN1Q9H9B4 322 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 SUFUQ9UMX1 484 aa13.23□□□□□ -0.29
FOXRED1-218ENST00000534315 KIAA1549LQ6ZVL6 1849 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 RNF103-CHMP3A0A140T963 221 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 A0A1B0GTW7 788 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 GSTA4O15217 222 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 GSNP06396 782 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 CSTF3Q12996 717 aaKnown RBP13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 PGS1Q32NB8 556 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 TMTC4Q5T4D3 741 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 ZNF765Q7L2R6 523 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 MMAAQ8IVH4 418 aaKnown RBP13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 RIMKLAQ8IXN7 391 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 KLHDC8AQ8IYD2 350 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 CFAP206Q8IYR0 622 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 TESCQ96BS2 214 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 FCRL1Q96LA6 429 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 ZCCHC2Q9C0B9 1178 aaKnown RBP13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 KCNH6Q9H252 994 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 EPHX3Q9H6B9 360 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 INVSQ9Y283 1065 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 MAN2B2Q9Y2E5 1009 aa13.22□□□□□ -0.29
FOXRED1-218ENST00000534315 A0A096LPI6 279 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 ERN1O75460 977 aaKnown RBP13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 GMNNO75496 209 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 RASAL1O95294 804 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 ACPPP15309 386 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 NELFEP18615 380 aaKnown RBP13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 FCARP24071 287 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 CDKN2CP42773 168 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 CLCN2P51788 898 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 LRIF1Q5T3J3 769 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 ADNP2Q6IQ32 1131 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 GRHL2Q6ISB3 625 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 GCNT7Q6ZNI0 430 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 SATL1Q86VE3 508 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 AADATQ8N5Z0 425 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 FAM86B1Q8N7N1 296 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 CSGALNACT1Q8TDX6 532 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 TFAP2CQ92754 450 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 PPP1R16AQ96I34 528 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 ITCHQ96J02 903 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 SH3GL1Q99961 368 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 CPPED1Q9BRF8 314 aaPredicted RBP13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 ANKRD60Q9BZ19 345 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 KAT8Q9H7Z6 458 aaKnown RBP13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 RMND5AQ9H871 391 aa13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 CARS2Q9HA77 564 aaKnown RBP13.21□□□□□ -0.29
FOXRED1-218ENST00000534315 DYRK4Q9NR20 520 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms