RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TUBA1AQ71U36 451 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 ESX1Q8N693 406 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 CCDC115Q96NT0 180 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 IFT52Q9Y366 437 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 ILVBLA1L0T0 632 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 TBL1XO60907 577 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 SCELO95171 688 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 HPCAL1P37235 193 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 SLC11A1P49279 550 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 ILF2Q12905 390 aaKnown RBP18.84■□□□□ 0.61
CAPN1-226ENST00000533820 NPTX1Q15818 432 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 ZNF691Q5VV52 312 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 ZCCHC8Q6NZY4 707 aaKnown RBP18.84■□□□□ 0.61
CAPN1-226ENST00000533820 TMC5Q6UXY8 1006 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 FAR1Q8WVX9 515 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 SELENOMQ8WWX9 145 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 DPH2Q9BQC3 489 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-226ENST00000533820 ACPTQ9BZG2 426 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 C1orf109Q9NX04 203 aa18.84■□□□□ 0.61
CAPN1-226ENST00000533820 SYN3O14994 580 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 SMAD6O43541 496 aaKnown RBP18.83■□□□□ 0.61
CAPN1-226ENST00000533820 PDYNP01213 254 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 IL6P05231 212 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 IFITM3Q01628 133 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 SF1Q15637 639 aaKnown RBP18.83■□□□□ 0.61
CAPN1-226ENST00000533820 LRRC73Q5JTD7 316 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 OR4F3Q6IEY1 312 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 FUT10Q6P4F1 479 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 NCEH1Q6PIU2 408 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 ZCCHC7Q8N3Z6 543 aaKnown RBP18.83■□□□□ 0.61
CAPN1-226ENST00000533820 SVOPLQ8N434 492 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 PJA1Q8NG27 643 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 CNDP2Q96KP4 475 aaKnown RBP18.83■□□□□ 0.61
CAPN1-226ENST00000533820 IL26Q9NPH9 171 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 CPQQ9Y646 472 aa18.83■□□□□ 0.61
CAPN1-226ENST00000533820 A0A1B0GVM2 712 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 POLR2EP19388 210 aaKnown RBP18.83■□□□□ 0.6
CAPN1-226ENST00000533820 PCMT1P22061 227 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 PRR23BQ6ZRT6 265 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 ZNF551Q7Z340 670 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-226ENST00000533820 DSG4Q86SJ6 1040 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 STK40Q8N2I9 435 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 WFDC5Q8TCV5 224 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 APOLD1Q96LR9 279 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 ZNF347Q96SE7 839 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 TNKS2Q9H2K2 1166 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 CLMPQ9H6B4 373 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 AMBNQ9NP70 447 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 ARL15Q9NXU5 204 aa18.83■□□□□ 0.6
CAPN1-226ENST00000533820 OR6C75A6NL08 312 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 CDK2AP1O14519 115 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 FKBP9O95302 570 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 RPS14P62263 151 aaKnown RBP18.82■□□□□ 0.6
CAPN1-226ENST00000533820 ZXDBP98169 803 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 ARHGEF6Q15052 776 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 CHRNA6Q15825 494 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 TAF12Q16514 161 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 HECTD3Q5T447 861 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 FKBP9P1Q75LS8 142 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 B3GNT8Q7Z7M8 397 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 GPR149Q86SP6 731 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 ADCK1Q86TW2 530 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 AADATQ8N5Z0 425 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 DTX3Q8N9I9 347 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 ZFYVE1Q9HBF4 777 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 CCRL2O00421 344 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 KPNA4O00629 521 aaPredicted RBP18.82■□□□□ 0.6
CAPN1-226ENST00000533820 KMOO15229 486 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 SEPT4O43236 478 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 OR1D2P34982 312 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 HMGCLP35914 325 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 TJAP1Q5JTD0 557 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 TSPAN33Q86UF1 283 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.82■□□□□ 0.6
CAPN1-226ENST00000533820 ZBTB2Q8N680 514 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 ZNF540Q8NDQ6 660 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 PYURFQ96I23 114 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 ALPK1Q96QP1 1244 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 EPS8L2Q9H6S3 715 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 QPCTLQ9NXS2 382 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 LHX3Q9UBR4 397 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 SLC28A1O00337 649 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 EOMESO95936 686 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 ZDHHC11BP0C7U3 371 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 DGKAP23743 735 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 AQP1P29972 269 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 CASP9P55211 416 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 HSPA14Q0VDF9 509 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 NFATC2Q13469 925 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 DDX39BQ13838 428 aaKnown RBP18.82■□□□□ 0.6
CAPN1-226ENST00000533820 TRIM71Q2Q1W2 868 aaKnown RBP18.82■□□□□ 0.6
CAPN1-226ENST00000533820 UBE2UQ5VVX9 321 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 MYO19Q96H55 970 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 MARCH5Q9NX47 278 aa18.82■□□□□ 0.6
CAPN1-226ENST00000533820 CHD5Q8TDI0 1954 aa18.81■□□□□ 0.6
CAPN1-226ENST00000533820 ZNF840PA6NDX5 716 aa18.81■□□□□ 0.6
CAPN1-226ENST00000533820 UGT2B11O75310 529 aa18.81■□□□□ 0.6
CAPN1-226ENST00000533820 STK16O75716 305 aa18.81■□□□□ 0.6
CAPN1-226ENST00000533820 MT-ND2P03891 347 aa18.81■□□□□ 0.6
CAPN1-226ENST00000533820 ABCB1P08183 1280 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms