RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 GP5P40197 560 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 ITGA1P56199 1179 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 DEFB110Q30KQ9 67 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 KBTBD12Q3ZCT8 623 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 FIGLAQ6QHK4 219 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 ZNF517Q6ZMY9 492 aaPredicted RBP19.67■□□□□ 0.74
CCS-208ENST00000533244 SLC38A9Q8NBW4 561 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 ZUFSPQ96AP4 578 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 RBBP8Q99708 897 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 MIPEPQ99797 713 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 PARVBQ9HBI1 364 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 LHX9Q9NQ69 397 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 ENAMQ9NRM1 1142 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 WDR70Q9NW82 654 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 MTRF1LQ9UGC7 380 aaKnown RBP19.67■□□□□ 0.74
CCS-208ENST00000533244 SERTAD3Q9UJW9 196 aa19.67■□□□□ 0.74
CCS-208ENST00000533244 WISP3O95389 354 aaPredicted RBP19.66■□□□□ 0.74
CCS-208ENST00000533244 CYP2A7P20853 494 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 NAB1Q13506 487 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 PRAMEF17Q5VTA0 474 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 SUSD1Q6UWL2 747 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 CEP128Q6ZU80 1094 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 CEP97Q8IW35 865 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 MCOLN3Q8TDD5 553 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 FBF1Q8TES7 1133 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 SLC45A3Q96JT2 553 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 CCDC138Q96M89 665 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 GPR22Q99680 433 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 TSPYL1Q9H0U9 437 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 PADI1Q9ULC6 663 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 PLCL2Q9UPR0 1127 aa19.66■□□□□ 0.74
CCS-208ENST00000533244 MTO1Q9Y2Z2 717 aaKnown RBP19.66■□□□□ 0.74
CCS-208ENST00000533244 E7EQ34 232 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 SYF2O95926 243 aaKnown RBP19.65■□□□□ 0.74
CCS-208ENST00000533244 CTSBP07858 339 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 RORAP35398 523 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 YBX1P67809 324 aaKnown RBP19.65■□□□□ 0.74
CCS-208ENST00000533244 POU4F1Q01851 419 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 GPS2Q13227 327 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 ZNF460Q14592 562 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 PHKG1Q16816 387 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 PPFIBP2Q8ND30 876 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 ANKRD7Q92527 254 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 KIAA1143Q96AT1 154 aaPredicted RBP19.65■□□□□ 0.74
CCS-208ENST00000533244 EFHD1Q9BUP0 239 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 L2HGDHQ9H9P8 463 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 GPN2Q9H9Y4 310 aaPredicted RBP19.65■□□□□ 0.74
CCS-208ENST00000533244 SLC6A20Q9NP91 592 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 EURLQ9NYK6 297 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 NINJ2Q9NZG7 142 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 STOX2Q9P2F5 926 aaPredicted RBP19.65■□□□□ 0.74
CCS-208ENST00000533244 TXNDC16Q9P2K2 825 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 CROTQ9UKG9 612 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 IKZF3Q9UKT9 509 aa19.65■□□□□ 0.74
CCS-208ENST00000533244 PCM1Q15154 2024 aa19.64■□□□□ 0.74
CCS-208ENST00000533244 OR2A25A4D2G3 310 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 CCNYL3P0C7X3 344 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 F8A1P23610 371 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 CMPK1P30085 196 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 RPA3P35244 121 aaPredicted RBP19.64■□□□□ 0.73
CCS-208ENST00000533244 GCGRP47871 477 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 NAA25Q14CX7 972 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 CTAGE3PQ8IX95 158 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 SYTL1Q8IYJ3 562 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 GPR135Q8IZ08 494 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 NKAPQ8N5F7 415 aaKnown RBP19.64■□□□□ 0.73
CCS-208ENST00000533244 IFT81Q8WYA0 676 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 ZNF285Q96NJ3 590 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 FMO2Q99518 471 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 ACAT2Q9BWD1 397 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 FUT8Q9BYC5 575 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 ACTR5Q9H9F9 607 aaPredicted RBP19.64■□□□□ 0.73
CCS-208ENST00000533244 AKIRIN1Q9H9L7 192 aaPredicted RBP19.64■□□□□ 0.73
CCS-208ENST00000533244 PCMTD2Q9NV79 361 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 ANKMY1Q9P2S6 941 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 IL17BQ9UHF5 180 aa19.64■□□□□ 0.73
CCS-208ENST00000533244 CACNA1GO43497 2377 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 IGKV1-8A0A0C4DH67 115 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 ZNF749O43361 778 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 CTSVO60911 334 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 OR2B3O76000 313 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 ENO2P09104 434 aaPredicted RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 SAT1P21673 171 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 AP1S2P56377 157 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 PRDX1Q06830 199 aaKnown RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 ZKSCAN8Q15776 578 aaPredicted RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 PPP1R3AQ16821 1122 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 ZC3H12BQ5HYM0 836 aaKnown RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 UBAP2Q5T6F2 1119 aaKnown RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 GRTP1Q5TC63 336 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 ICE2Q659A1 982 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 ZNF385CQ66K41 422 aaPredicted RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 SBSNQ6UWP8 590 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 MBOAT1Q6ZNC8 495 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 RNF44Q7L0R7 432 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 MCATQ8IVS2 390 aaKnown RBP19.63■□□□□ 0.73
CCS-208ENST00000533244 DSELQ8IZU8 1212 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 PPM1NQ8N819 430 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 ANKRD49Q8WVL7 239 aa19.63■□□□□ 0.73
CCS-208ENST00000533244 N4BP2L2Q92802 583 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms