RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 IGHV5-51A0A0C4DH38 117 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 A0A0J9YY10 115 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 A0A1W2PPV9 198 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 SLC9B1P1A6NJY1 282 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 FOXO6A8MYZ6 492 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 SUPT3HB4E1H0 165 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 GLRA3O75311 464 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 SUPT3HO75486 399 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 CCNDBP1O95273 360 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZBTB11O95625 1053 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 TOP3BO95985 862 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 ADRB1P08588 477 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 MYZAPP0CAP1 466 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 CMPK1P30085 196 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 PEBP1P30086 187 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 CRHR1P34998 444 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 SEPHS1P49903 392 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 HSD11B2P80365 405 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 ABATP80404 500 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 PRDX1Q06830 199 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 TMTC4Q5T4D3 741 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 SH2D5Q6ZV89 423 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 RAB11FIP2Q7L804 512 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 ERMP1Q7Z2K6 904 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 TRABD2AQ86V40 505 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 MARCH9Q86YJ5 346 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 FBXO39Q8N4B4 442 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 OR56A3Q8NH54 315 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 WDR36Q8NI36 951 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 FLVCR1-AS1Q8TAF5 88 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 EXT2Q93063 718 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZUFSPQ96AP4 578 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 LIN37Q96GY3 246 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 PPM1MQ96MI6 270 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 TRAPPC9Q96Q05 1148 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 ATOH8Q96SQ7 321 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 MIPEPQ99797 713 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 ACAT2Q9BWD1 397 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 PITPNM3Q9BZ71 974 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 MRPL46Q9H2W6 279 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 CENPHQ9H3R5 247 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 ZNF768Q9H5H4 540 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 CNOT10Q9H9A5 744 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 TAC3Q9UHF0 121 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 GRID1Q9ULK0 1009 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 TMCO1Q9UM00 188 aa10.84□□□□□ -0.67
TRAPPC4-211ENST00000533012 GOLGA6L10A6NI86 522 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 TARM1B6A8C7 271 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 UBXN8O00124 270 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 AGRPO00253 132 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 COPEO14579 308 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 TAPBPO15533 448 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SMIM24O75264 130 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 GFAPP14136 432 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 NPPBP16860 134 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 NELFEP18615 380 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 GGT5P36269 586 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 LSSP48449 732 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 TBPL1P62380 186 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC18A2Q05940 514 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 NAA25Q14CX7 972 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 C16orf72Q14CZ0 275 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 ZXDCQ2QGD7 858 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 PTCHD3Q3KNS1 767 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 TECRLQ5HYJ1 363 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 PRAMEF13Q5VWM6 474 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 KIAA1614Q5VZ46 1190 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 ICE2Q659A1 982 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 C16orf46Q6P387 395 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 LCTLQ6UWM7 567 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 TRIM73Q86UV7 250 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 THOC6Q86W42 341 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 FAM20CQ8IXL6 584 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SRRM1Q8IYB3 904 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 C4orf33Q8N1A6 199 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 PDPRQ8NCN5 879 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 OR2L3Q8NG85 312 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 PYCR2Q96C36 320 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 TCTN2Q96GX1 697 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC41A2Q96JW4 573 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SMC6Q96SB8 1091 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 HAUS8Q9BT25 410 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SCNM1Q9BWG6 230 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SGPP1Q9BX95 441 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 KLHL25Q9H0H3 589 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 STMN4Q9H169 189 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 PDE7BQ9NP56 450 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 MRPS30Q9NP92 439 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SOHLH2Q9NX45 425 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 WWOXQ9NZC7 414 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 TMEM216Q9P0N5 145 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SENP1Q9P0U3 644 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 CPSF2Q9P2I0 782 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 XPR1Q9UBH6 696 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 PTBP2Q9UKA9 531 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 KLK13Q9UKR3 277 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SNX7Q9UNH6 387 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC22A14Q9Y267 594 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 LOXL2Q9Y4K0 774 aa10.83□□□□□ -0.68
TRAPPC4-211ENST00000533012 NEUROG3Q9Y4Z2 214 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms