RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TSTA3Q13630 321 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-204ENST00000532550 FASTKQ14296 549 aaKnown RBP16.54■□□□□ 0.24
PHRF1-204ENST00000532550 CRYMQ14894 314 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 ARHGAP19Q14CB8 494 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 SPANXN3Q5MJ09 141 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 FAM69BQ5VUD6 431 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 UGT3A1Q6NUS8 523 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 TTLL10Q6ZVT0 673 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 OR2L3Q8NG85 312 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 OR2A1Q8NGT9 310 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 ADAMTS17Q8TE56 1095 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 SMPDL3AQ92484 453 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 GPR21Q99679 349 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 SLC30A3Q99726 388 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 SELENOSQ9BQE4 189 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 ING2Q9H160 280 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 PYCARDQ9ULZ3 195 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 TP53TG5Q9Y2B4 290 aa16.54■□□□□ 0.24
PHRF1-204ENST00000532550 ZNF839A8K0R7 811 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 CCDC188H7C350 402 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 PYCARD-AS1I3L0S3 204 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 MYO1CO00159 1063 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 SMAPO00193 183 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 BANF1O75531 89 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 DNAJB5O75953 348 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 SYF2O95926 243 aaKnown RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 PIM1P11309 404 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 IVDP26440 423 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 PSMB5P28074 263 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 RPA3P35244 121 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 SSPNQ14714 243 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 GRM7Q14831 915 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 NAA25Q14CX7 972 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 MORF4L2Q15014 288 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 FAM214AQ32MH5 1076 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 NKAIN1Q4KMZ8 207 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 MSS51Q4VC12 460 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 YOD1Q5VVQ6 348 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 ASB18Q6ZVZ8 466 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 RAB43Q86YS6 212 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 TTC29Q8NA56 475 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 C2CD4AQ8NCU7 369 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 PKP4Q99569 1192 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 AARSD1Q9BTE6 412 aaKnown RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 ACAT2Q9BWD1 397 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 TRIM55Q9BYV6 548 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 PPANQ9NQ55 473 aaKnown RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 RNF14Q9UBS8 474 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 MED16Q9Y2X0 877 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 PTRH2Q9Y3E5 179 aaKnown RBP16.53■□□□□ 0.24
PHRF1-204ENST00000532550 FER1L5A0AVI2 2057 aa16.53■□□□□ 0.24
PHRF1-204ENST00000532550 A0A1W2PPV9 198 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 KLF7O75840 302 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-204ENST00000532550 WISP1O95388 367 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 FOLR3P41439 243 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 SKIV2L2P42285 1042 aaKnown RBP16.52■□□□□ 0.24
PHRF1-204ENST00000532550 CARSP49589 748 aaKnown RBP16.52■□□□□ 0.24
PHRF1-204ENST00000532550 PNLIPRP1P54315 467 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 VSX2P58304 361 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-204ENST00000532550 KCNC4Q03721 635 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 KLRB1Q12918 225 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 CHAF1BQ13112 559 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 SLC9A5Q14940 896 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 SUSD1Q6UWL2 747 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 CYHR1Q6ZMK1 362 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 MED25Q71SY5 747 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 TMEM102Q8N9M5 508 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-204ENST00000532550 TEX19Q8NA77 164 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 FBXO15Q8NCQ5 510 aaPredicted RBP16.52■□□□□ 0.24
PHRF1-204ENST00000532550 GIMAP7Q8NHV1 300 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 ASB11Q8WXH4 323 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 IP6K3Q96PC2 410 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 DPH7Q9BTV6 452 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 TRIM4Q9C037 500 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 MRPS30Q9NP92 439 aaKnown RBP16.52■□□□□ 0.24
PHRF1-204ENST00000532550 CUTCQ9NTM9 273 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 TRMT6Q9UJA5 497 aaKnown RBP16.52■□□□□ 0.24
PHRF1-204ENST00000532550 KLK4Q9Y5K2 254 aa16.52■□□□□ 0.24
PHRF1-204ENST00000532550 A0A0J9YVX5 310 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 A0A1B0GX78 115 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 GFYI3L273 518 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 K7EM74 188 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 EIF3FO00303 357 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-204ENST00000532550 TTI1O43156 1089 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 CTSVO60911 334 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 ERGP11308 486 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 NR1D1P20393 614 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 OTX2P32243 289 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 CASRP41180 1078 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 ELK3P41970 407 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 RRADP55042 308 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 TLE1Q04724 770 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 WASHC2DQ5SRD0 308 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 HP1BP3Q5SSJ5 553 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-204ENST00000532550 CPZQ66K79 652 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 UBE2R2Q712K3 238 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-204ENST00000532550 IGDCC3Q8IVU1 814 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 CPNE9Q8IYJ1 553 aa16.51■□□□□ 0.23
PHRF1-204ENST00000532550 CD200R1Q8TD46 325 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms