RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 SLX1AQ9BQ83 275 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 WDR77Q9BQA1 342 aaPredicted RBP5.78□□□□□ -1.48
NUP98-215ENST00000529063 HGH1Q9BTY7 390 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 FICDQ9BVA6 458 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 SRMSQ9H3Y6 488 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 TFB2MQ9H5Q4 396 aaKnown RBP5.78□□□□□ -1.48
NUP98-215ENST00000529063 FAM96AQ9H5X1 160 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 ASB8Q9H765 288 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 C10orf88Q9H8K7 445 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 SLC6A20Q9NP91 592 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 SPHK1Q9NYA1 384 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.78□□□□□ -1.48
NUP98-215ENST00000529063 KLHL8Q9P2G9 620 aaPredicted RBP5.78□□□□□ -1.48
NUP98-215ENST00000529063 SRPK3Q9UPE1 567 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 ENTPD4Q9Y227 616 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 PADI2Q9Y2J8 665 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 PKP3Q9Y446 797 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 HYOU1Q9Y4L1 999 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 COLEC10Q9Y6Z7 277 aa5.78□□□□□ -1.48
NUP98-215ENST00000529063 ZNF469Q96JG9 3925 aaPredicted RBP5.78□□□□□ -1.48
NUP98-215ENST00000529063 NF1P21359 2839 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 TRBV5-4A0A0C4DH59 114 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 C17orf113A0A1B0GUU1 675 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 CCDC78A2IDD5 438 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 CCDC66A2RUB6 948 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 KLHL33A6NCF5 533 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 C2orf74A8MZ97 194 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 AGPSO00116 658 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 STX7O15400 261 aaKnown RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 ZSCAN9O15535 394 aaPredicted RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 HNRNPRO43390 633 aaKnown RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 CBFA2T2O43439 604 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 CST8O60676 142 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 PPM1BO75688 479 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 OR2B3O76000 313 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 SERPINC1P01008 464 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 ALPPP05187 535 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 HBQ1P09105 142 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 PYGMP11217 842 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 ZFXP17010 805 aaPredicted RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 AGXTP21549 392 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 TSFMP43897 325 aaKnown RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 GLRBP48167 497 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 MARCKSL1P49006 195 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 TDGF1P3P51864 188 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 Q0VFX4 171 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 PRKG2Q13237 762 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 MPP3Q13368 585 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 TAF1AQ15573 450 aaPredicted RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 LRRC38Q5VT99 294 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 PRAMEF13Q5VWM6 474 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 DENND5AQ6IQ26 1287 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 RANBP10Q6VN20 620 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 COX15Q7KZN9 410 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 ZC3H18Q86VM9 953 aaKnown RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 AMIGO1Q86WK6 493 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 MCEMP1Q8IX19 187 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 FAM20CQ8IXL6 584 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 ZADH2Q8N4Q0 377 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 AFAP1L2Q8N4X5 818 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 DTWD1Q8N5C7 304 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 OR5AR1Q8NGP9 310 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 SLC35G2Q8TBE7 412 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 PROKR1Q8TCW9 393 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 TFB1MQ8WVM0 346 aaKnown RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 EDARADDQ8WWZ3 215 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 HAUS1Q96CS2 278 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 RBM41Q96IZ5 413 aaKnown RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 IP6K3Q96PC2 410 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 APOL2Q9BQE5 337 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 CCM2Q9BSQ5 444 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 CHRNA10Q9GZZ6 450 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 NAT10Q9H0A0 1025 aaKnown RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 GBA3Q9H227 469 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 GOLPH3Q9H4A6 298 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 INTS7Q9NVH2 962 aaKnown RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 IFT80Q9P2H3 777 aaPredicted RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 LCMT1Q9UIC8 334 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 SERTAD3Q9UJW9 196 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 FBXL4Q9UKA2 621 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 OSGIN2Q9Y236 505 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 HEBP2Q9Y5Z4 205 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 HS3ST3B1Q9Y662 390 aa5.77□□□□□ -1.49
NUP98-215ENST00000529063 NCOA6Q14686 2063 aaPredicted RBP5.77□□□□□ -1.49
NUP98-215ENST00000529063 POLQO75417 2590 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 hCG_1818297A0A087WSY0 165 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 A0A0J9YY10 115 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 PRSS44E7EML9 344 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 PEX12O00623 359 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 DEAF1O75398 565 aaPredicted RBP5.76□□□□□ -1.49
NUP98-215ENST00000529063 IPO13O94829 963 aaKnown RBP5.76□□□□□ -1.49
NUP98-215ENST00000529063 MBD3O95983 291 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 STSP08842 583 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 CHRM5P08912 532 aaPredicted RBP5.76□□□□□ -1.49
NUP98-215ENST00000529063 TNNT1P13805 278 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 ATP1B2P14415 290 aaPredicted RBP5.76□□□□□ -1.49
NUP98-215ENST00000529063 CPEP16870 476 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 MMP11P24347 488 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 ITGA3P26006 1051 aa5.76□□□□□ -1.49
NUP98-215ENST00000529063 PSMB4P28070 264 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms