RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PHOX2BQ99453 314 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 KCNS3Q9BQ31 491 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 SMOC2Q9H3U7 446 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 IGSF5Q9NSI5 407 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 RAPGEFL1Q9UHV5 662 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 AGAP5A6NIR3 686 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 DCLK1O15075 740 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 EPN2O95208 641 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 GBAP04062 536 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 CYP11A1P05108 521 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 OR56A5P0C7T3 313 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 CDC20Q12834 499 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 ELAVL2Q12926 359 aaKnown RBP17.47■□□□□ 0.39
LTBP3-210ENST00000528516 CSTF3Q12996 717 aaKnown RBP17.47■□□□□ 0.39
LTBP3-210ENST00000528516 CDK5R2Q13319 367 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 ZNF678Q5SXM1 525 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 ZNF517Q6ZMY9 492 aaPredicted RBP17.47■□□□□ 0.39
LTBP3-210ENST00000528516 UBE2R2Q712K3 238 aaPredicted RBP17.47■□□□□ 0.39
LTBP3-210ENST00000528516 SPERTQ8NA61 448 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 MMP27Q9H306 513 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 LOXHD1Q8IVV2 1947 aa17.47■□□□□ 0.39
LTBP3-210ENST00000528516 TMCC2O75069 709 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 DUSP11O75319 330 aaKnown RBP17.46■□□□□ 0.39
LTBP3-210ENST00000528516 CDK14O94921 469 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 TUBA1BP68363 451 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 TXNDC8Q6A555 127 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 HIST2H2AA3Q6FI13 130 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 FUT10Q6P4F1 479 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 TUBA1AQ71U36 451 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 GALNT10Q86SR1 603 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 HIPK1Q86Z02 1210 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 BRSK1Q8TDC3 778 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 IGSF8Q969P0 613 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 ASB2Q96Q27 587 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 HMX1Q9NP08 348 aaPredicted RBP17.46■□□□□ 0.39
LTBP3-210ENST00000528516 RAB23Q9ULC3 237 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 INSIG1O15503 277 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 SLC7A4O43246 635 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 ACSL4O60488 711 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 RPIAP49247 311 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 CDKN1CP49918 316 aaPredicted RBP17.46■□□□□ 0.39
LTBP3-210ENST00000528516 CRHR2Q13324 411 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 SMN1Q16637 294 aaKnown RBP17.46■□□□□ 0.39
LTBP3-210ENST00000528516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.46■□□□□ 0.39
LTBP3-210ENST00000528516 BEND5Q7L4P6 421 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 PGBD3Q8N328 593 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 TAS2R9Q9NYW1 312 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 CFAP97Q9P2B7 532 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 ZFC3H1O60293 1989 aaKnown RBP17.46■□□□□ 0.39
LTBP3-210ENST00000528516 SLC15A1P46059 708 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 AIF1P55008 147 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 NAE1Q13564 534 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 PTGR1Q14914 329 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 UNC50Q53HI1 259 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 GDPD3Q7L5L3 318 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 LIX1Q8N485 282 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 RELTQ969Z4 430 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 APOL4Q9BPW4 351 aa17.46■□□□□ 0.39
LTBP3-210ENST00000528516 TNPO3Q9Y5L0 923 aaKnown RBP17.46■□□□□ 0.39
LTBP3-210ENST00000528516 A0A0G2JN53 185 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 TCRBV5S2A0A599 114 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 ANKDD1BA6NHY2 528 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 ZNF487B1APH4 448 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 DNAJB5O75953 348 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 HRH2P25021 359 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 SOX6P35712 828 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 GNPDA1P46926 289 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 CDKN2DP55273 166 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 FOXM1Q08050 763 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 CDK10Q15131 360 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 PLA2G4EQ3MJ16 856 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 ERAP2Q6P179 960 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 NATD1Q8N6N6 113 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 RHNO1Q9BSD3 238 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 NTN4Q9HB63 628 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 HECAQ9UBI9 543 aaPredicted RBP17.45■□□□□ 0.38
LTBP3-210ENST00000528516 PCDHB8Q9UN66 801 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 WASP42768 502 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 PLEKHG6Q3KR16 790 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 RGMBQ6NW40 437 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 FAM20CQ8IXL6 584 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 PARP16Q8N5Y8 322 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 FAM86B1Q8N7N1 296 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 TEX37Q96LM6 180 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 KIFC1Q9BW19 673 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 ARHGAP39Q9C0H5 1083 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 LRTM1Q9HBL6 345 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 TMCC3Q9ULS5 477 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 NEDD8-MDP1E9PL57 170 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 P2RX3P56373 397 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 ARMCX4Q5H9R4 360 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 BPHLQ86WA6 291 aaPredicted RBP17.45■□□□□ 0.38
LTBP3-210ENST00000528516 C7orf57Q8NEG2 295 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 PIK3R3Q92569 461 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 MTERF3Q96E29 417 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
LTBP3-210ENST00000528516 GREB1LQ9C091 1923 aaPredicted RBP17.45■□□□□ 0.38
LTBP3-210ENST00000528516 SSX4O60224 188 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 STK16O75716 305 aa17.44■□□□□ 0.38
LTBP3-210ENST00000528516 CYP2A7P20853 494 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms