RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 ZIC1Q15915 447 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 KIAA1614Q5VZ46 1190 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 FIGLAQ6QHK4 219 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 SUSD1Q6UWL2 747 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 ZDHHC24Q6UX98 284 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 ZC3HC1Q86WB0 502 aaKnown RBP12.88□□□□□ -0.35
CAPN1-215ENST00000528396 NOA1Q8NC60 698 aaKnown RBP12.88□□□□□ -0.35
CAPN1-215ENST00000528396 FBXO15Q8NCQ5 510 aaPredicted RBP12.88□□□□□ -0.35
CAPN1-215ENST00000528396 OR2L3Q8NG85 312 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 FLVCR1-AS1Q8TAF5 88 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 ZUFSPQ96AP4 578 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 TSPAN17Q96FV3 270 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 CPNE1Q99829 537 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 ARHGAP9Q9BRR9 750 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 NDC1Q9BTX1 674 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 FAM129AQ9BZQ8 928 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 CHRNA10Q9GZZ6 450 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 PARVBQ9HBI1 364 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 FAM60AQ9NP50 221 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 LHX9Q9NQ69 397 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 TXLNGQ9NUQ3 528 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 CROTQ9UKG9 612 aa12.88□□□□□ -0.35
CAPN1-215ENST00000528396 RALYQ9UKM9 306 aaKnown RBP12.88□□□□□ -0.35
CAPN1-215ENST00000528396 PIEZO2Q9H5I5 2752 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 C21orf140B9A014 251 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 GFYI3L273 518 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 ZSCAN9O15535 394 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-215ENST00000528396 ZNF749O43361 778 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 PIAS1O75925 651 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 PRKAR1AP10644 381 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 AGXTP21549 392 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 PSMB5P28074 263 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 PHBP35232 272 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 GRIA3P42263 894 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 FASTKQ14296 549 aaKnown RBP12.87□□□□□ -0.35
CAPN1-215ENST00000528396 TLDC1Q6P9B6 456 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 CYHR1Q6ZMK1 362 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 ADCK2Q7Z695 626 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 MCATQ8IVS2 390 aaKnown RBP12.87□□□□□ -0.35
CAPN1-215ENST00000528396 NKAPQ8N5F7 415 aaKnown RBP12.87□□□□□ -0.35
CAPN1-215ENST00000528396 PPM1NQ8N819 430 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 CT55Q8WUE5 264 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 ZNF480Q8WV37 535 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 SNRNP27Q8WVK2 155 aaKnown RBP12.87□□□□□ -0.35
CAPN1-215ENST00000528396 STARD8Q92502 1023 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 DLG3Q92796 817 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 ALKBH8Q96BT7 664 aaKnown RBP12.87□□□□□ -0.35
CAPN1-215ENST00000528396 MED8Q96G25 268 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 SLC45A3Q96JT2 553 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 CCDC138Q96M89 665 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 OLFM1Q99784 485 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 MRPS30Q9NP92 439 aaKnown RBP12.87□□□□□ -0.35
CAPN1-215ENST00000528396 CCDC177Q9NQR7 707 aaPredicted RBP12.87□□□□□ -0.35
CAPN1-215ENST00000528396 EURLQ9NYK6 297 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 TAC3Q9UHF0 121 aa12.87□□□□□ -0.35
CAPN1-215ENST00000528396 TARM1B6A8C7 271 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 C9J4A7 227 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 ERVH48-1M5A8F1 160 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 MEN1O00255 615 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 ERGP11308 486 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 SPRP35270 261 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-215ENST00000528396 GP5P40197 560 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 TIAL1Q01085 375 aaKnown RBP eCLIP12.86□□□□□ -0.35
CAPN1-215ENST00000528396 POU4F1Q01851 419 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 USP10Q14694 798 aaKnown RBP12.86□□□□□ -0.35
CAPN1-215ENST00000528396 TCTE1Q5JU00 501 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 PRAMEF17Q5VTA0 474 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 C16orf46Q6P387 395 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 FAM199XQ6PEV8 388 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-215ENST00000528396 FRA10AC1Q70Z53 315 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 CYS1Q717R9 158 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 SPNS2Q8IVW8 549 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 DNAJC22Q8N4W6 341 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 ZNF655Q8N720 491 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-215ENST00000528396 TTC29Q8NA56 475 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-215ENST00000528396 PPFIBP2Q8ND30 876 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 OR2A1Q8NGT9 310 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 FBF1Q8TES7 1133 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 SEC14L1Q92503 715 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 FMO2Q99518 471 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 C17orf62Q9BQA9 187 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 DPH2Q9BQC3 489 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-215ENST00000528396 DPH7Q9BTV6 452 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 SLC12A9Q9BXP2 914 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 SPRTNQ9H040 489 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-215ENST00000528396 PCBD2Q9H0N5 130 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 LRRC4CQ9HCJ2 640 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 GPAMQ9HCL2 828 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 ARL15Q9NXU5 204 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 NDOR1Q9UHB4 597 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 IL17BQ9UHF5 180 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 ADAMTS6Q9UKP5 1117 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 SRPK3Q9UPE1 567 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 PDE10AQ9Y233 779 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 MGAQ8IWI9 3026 aa12.86□□□□□ -0.35
CAPN1-215ENST00000528396 FAM159BA6NKW6 160 aa12.85□□□□□ -0.35
CAPN1-215ENST00000528396 E7ENX8 843 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms