RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ATP6V1E2Q96A05 226 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 RHBDF1Q96CC6 855 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 TUBGCP3Q96CW5 907 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 RCN3Q96D15 328 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 WWOXQ9NZC7 414 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 ASF1AQ9Y294 204 aa18.23■□□□□ 0.51
SMPD1-203ENST00000527275 FANCMQ8IYD8 2048 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 ARHGEF33A8MVX0 844 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 EML2O95834 649 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 LMNAP02545 664 aaKnown RBP18.22■□□□□ 0.51
SMPD1-203ENST00000527275 CTSEP14091 401 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 ATP4BP51164 291 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 SP140Q13342 867 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 C1orf61Q13536 156 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 FASTKQ14296 549 aaKnown RBP18.22■□□□□ 0.51
SMPD1-203ENST00000527275 CLCA4Q14CN2 919 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 LPAL2Q16609 132 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 AGKQ53H12 422 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.22■□□□□ 0.51
SMPD1-203ENST00000527275 CAPRIN2Q6IMN6 1127 aaKnown RBP18.22■□□□□ 0.51
SMPD1-203ENST00000527275 PGM2L1Q6PCE3 622 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 GK5Q6ZS86 529 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 CDYL2Q8N8U2 506 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 DCBLD1Q8N8Z6 715 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 PHC3Q8NDX5 983 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 HMGCLL1Q8TB92 370 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 CDK15Q96Q40 435 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 LRRC61Q9BV99 259 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 CD244Q9BZW8 370 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 EFCAB1Q9HAE3 211 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 NKX1-2Q9UD57 310 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-203ENST00000527275 GIMAP2Q9UG22 337 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 POLG2Q9UHN1 485 aa18.22■□□□□ 0.51
SMPD1-203ENST00000527275 OR52A4PA6NMU1 304 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 IFRD1O00458 451 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 OR7A17O14581 309 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 SLC16A5O15375 505 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 CCNT2O60583 730 aaKnown RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 ALDOCP09972 364 aaKnown RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 LBPP18428 481 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 ARL1P40616 181 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 TBL3Q12788 808 aaKnown RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 GRB7Q14451 532 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 TEAD4Q15561 434 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 UAP1L1Q3KQV9 507 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 CCSMST1Q4G0I0 132 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 C16orf89Q6UX73 402 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 SYT12Q8IV01 421 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 DSELQ8IZU8 1212 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 MCOLN3Q8TDD5 553 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 TMEM79Q9BSE2 394 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 DCLRE1BQ9H816 532 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 IPPKQ9H8X2 491 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 PFDN4Q9NQP4 134 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 ARL15Q9NXU5 204 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 CCDC167Q9P0B6 97 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 CIDEBQ9UHD4 219 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 C1orf105O95561 183 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 CATP04040 527 aaKnown RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 ANXA5P08758 320 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 ENO2P09104 434 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 HIST1H2AGP0C0S8 130 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 HIST1H2ADP20671 130 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 CYP2A7P20853 494 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 MAP4P27816 1152 aaKnown RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 GDF5P43026 501 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 BDKRB1P46663 353 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 STX1BP61266 288 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 MAPRE2Q15555 327 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 KIF19Q2TAC6 998 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 TRMT5Q32P41 509 aaKnown RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 LETMD1Q6P1Q0 360 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 HIST1H2AHQ96KK5 128 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 C12orf66Q96MD2 445 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 INSM2Q96T92 566 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 HIST1H2AJQ99878 128 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 H2AFJQ9BTM1 129 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 TRIM54Q9BYV2 358 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 SCHIP1Q9P0W5 487 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-203ENST00000527275 OPTCQ9UBM4 332 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 SUSD2Q9UGT4 822 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 ANGPTL3Q9Y5C1 460 aa18.21■□□□□ 0.51
SMPD1-203ENST00000527275 GPR179Q6PRD1 2367 aa18.21■□□□□ 0.5
SMPD1-203ENST00000527275 OTCP00480 354 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 HGFP14210 728 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 MAPK9P45984 424 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 ART3Q13508 389 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 C1orf146Q5VVC0 180 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 OR5AR1Q8NGP9 310 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 METTL6Q8TCB7 284 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 UBTD2Q8WUN7 234 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 GSDMCQ9BYG8 508 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 IMP3Q9NV31 184 aaKnown RBP18.2■□□□□ 0.5
SMPD1-203ENST00000527275 H0Y3Z8 333 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 CCNG1P51959 295 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 STX5Q13190 355 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 CDKL4Q5MAI5 379 aa18.2■□□□□ 0.5
SMPD1-203ENST00000527275 METTL2BQ6P1Q9 378 aaKnown RBP18.2■□□□□ 0.5
SMPD1-203ENST00000527275 DUS1LQ6P1R4 473 aaKnown RBP18.2■□□□□ 0.5
SMPD1-203ENST00000527275 SCIMPQ6UWF3 145 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms