RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 PSIP1O75475 530 aaKnown RBP12.85□□□□□ -0.35
CAPN1-207ENST00000527189 CTSBP07858 339 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 ERGP11308 486 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 VARSP26640 1264 aaKnown RBP12.85□□□□□ -0.35
CAPN1-207ENST00000527189 VPS41P49754 854 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 SOX8P57073 446 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 ATP1A4Q13733 1029 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 THOC5Q13769 683 aaKnown RBP12.85□□□□□ -0.35
CAPN1-207ENST00000527189 TTLL9Q3SXZ7 439 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 ANKRD22Q5VYY1 191 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 CNSTQ6PJW8 725 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 OVCH1Q7RTY7 1134 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 MRGPREQ86SM8 312 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 FAM20CQ8IXL6 584 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 CLEC1AQ8NC01 280 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 OR2L3Q8NG85 312 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 OR2A1Q8NGT9 310 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 OR9A1PQ8NGU1 263 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 CALML6Q8TD86 181 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 MS4A14Q96JA4 679 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 SERPINB12Q96P63 405 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 SLC26A1Q9H2B4 701 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 WDR54Q9H977 334 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 ANKMY1Q9P2S6 941 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 KLHL20Q9Y2M5 609 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 COMMD10Q9Y6G5 202 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 FBN2P35556 2912 aa12.85□□□□□ -0.35
CAPN1-207ENST00000527189 ZCWPW2A0A1B0GU75 182 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 A0A1W2PPV9 198 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 TTLL8A6PVC2 850 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 ZNF839A8K0R7 811 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 MYO1CO00159 1063 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 DSCR3O14972 297 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 ZSCAN12O43309 604 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 PHF2O75151 1096 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 USP1O94782 785 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 OTX2P32243 289 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 MAGEA3P43357 314 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 FNTAP49354 379 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 MLLT10P55197 1068 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 UBAP2LQ14157 1087 aaKnown RBP12.84□□□□□ -0.35
CAPN1-207ENST00000527189 KLHL38Q2WGJ6 581 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 CCSMST1Q4G0I0 132 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 DCAF10Q5QP82 559 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 FAM69BQ5VUD6 431 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 TTLL10Q6ZVT0 673 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 TAX1BP1Q86VP1 789 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 TTC29Q8NA56 475 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-207ENST00000527189 FBXO15Q8NCQ5 510 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-207ENST00000527189 SMPDL3AQ92484 453 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 KCNJ9Q92806 393 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 SELENOSQ9BQE4 189 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 NUDT9Q9BW91 350 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 CCDC68Q9H2F9 335 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 SLC22A11Q9NSA0 550 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 CUTCQ9NTM9 273 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 CIDEBQ9UHD4 219 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 NXT1Q9UKK6 140 aaKnown RBP12.84□□□□□ -0.35
CAPN1-207ENST00000527189 PLAAQ9Y263 795 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 FAM169AQ9Y6X4 670 aa12.84□□□□□ -0.35
CAPN1-207ENST00000527189 SNRNP200O75643 2136 aaKnown RBP12.83□□□□□ -0.35
CAPN1-207ENST00000527189 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 CTAGE9A4FU28 777 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 CLEC18AA5D8T8 446 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 AGPSO00116 658 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 IPO13O94829 963 aaKnown RBP12.83□□□□□ -0.36
CAPN1-207ENST00000527189 CATP04040 527 aaKnown RBP12.83□□□□□ -0.36
CAPN1-207ENST00000527189 ALPPP05187 535 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 ENO3P13929 434 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-207ENST00000527189 MMP11P24347 488 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 CMPK1P30085 196 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 BDKRB1P46663 353 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 CLCN7P51798 805 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 TERF1P54274 439 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 EMP3P54852 163 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 RELAQ04206 551 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 LONRF1Q17RB8 773 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 ACSBG2Q5FVE4 666 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 WASHC2DQ5SRD0 308 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 VWA5B1Q5TIE3 1220 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 ZNF470Q6ECI4 717 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 PRMT9Q6P2P2 845 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 IGFL3Q6UXB1 125 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 CLEC18BQ6UXF7 455 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 REXO1L1PQ8IX06 675 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 PPIL6Q8IXY8 311 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 EFCAB3Q8N7B9 438 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 NAT8LQ8N9F0 302 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 CLEC18CQ8NCF0 446 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 GALNT11Q8NCW6 608 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 GABPB2Q8TAK5 448 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-207ENST00000527189 ZNF669Q96BR6 464 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-207ENST00000527189 VPS50Q96JG6 964 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 SIGLEC10Q96LC7 697 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 OSBPL9Q96SU4 736 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 ATP13A2Q9NQ11 1180 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 P4HTMQ9NXG6 502 aa12.83□□□□□ -0.36
CAPN1-207ENST00000527189 UTP6Q9NYH9 597 aaKnown RBP12.83□□□□□ -0.36
CAPN1-207ENST00000527189 FER1L5A0AVI2 2057 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms