RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 hCG_1818297A0A087WSY0 165 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 TISP43B9A030 160 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 RAB36O95755 333 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 CH25HO95992 272 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 PKMP14618 531 aaKnown RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 NUDT6P53370 316 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 PSRC1Q6PGN9 363 aaPredicted RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 NCCRP1Q6ZVX7 275 aaPredicted RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ZER1Q7Z7L7 766 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 TXNRD3Q86VQ6 643 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 SMG8Q8ND04 991 aaKnown RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 REPS2Q8NFH8 660 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 AGAP2Q99490 1192 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 FAM83DQ9H4H8 585 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 LRRC19Q9H756 370 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 POT1Q9NUX5 634 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 LRFN1Q9P244 771 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 PCTPQ9UKL6 214 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 PCDHGC3Q9UN70 934 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 TLL2Q9Y6L7 1015 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 A2ML1A8K2U0 1454 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 SAP18O00422 153 aaKnown RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 CLN5O75503 358 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 OR4F21O95013 312 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ADH7P40394 386 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 PLA2G16P53816 162 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 RHDQ02161 417 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 NIPAL1Q6NVV3 410 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ATAD1Q8NBU5 361 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 STON2Q8WXE9 905 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 SLC35C1Q96A29 364 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 SLC30A2Q9BRI3 323 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 TIGARQ9NQ88 270 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 POLE4Q9NR33 117 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 A0A0U1RQJ8 604 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ZNF670-ZNF695F2Z2N8 137 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 BRINP1O60477 761 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 CDK14O94921 469 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 DLSTP36957 453 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 DYRK1AQ13627 763 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ELOAQ14241 798 aaKnown RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 DPY19L4Q7Z388 723 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 PRELID2Q8N945 189 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 OR14A2Q96R54 314 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 NDC1Q9BTX1 674 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ITM2CQ9NQX7 267 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 CCND3P30281 292 aaPredicted RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 RPS3AP61247 264 aaKnown RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 HNRNPKP61978 463 aaKnown RBP eCLIP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ARL13AQ5H913 290 aaPredicted RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 DDX1Q92499 740 aaKnown RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 RHBDF1Q96CC6 855 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ZNF670Q9BS34 389 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 TTTY10Q9BZA0 68 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 PHPT1Q9NRX4 125 aaPredicted RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 HECAQ9UBI9 543 aaPredicted RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ACKR2O00590 384 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 ZNF136P52737 540 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 SCARB2Q14108 478 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 SLC1A5Q15758 541 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 BCL2A1Q16548 175 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 CHRFAM7AQ494W8 412 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 NADK2Q4G0N4 442 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 METTL3Q86U44 580 aaKnown RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 NPLQ9BXD5 320 aaPredicted RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 PNO1Q9NRX1 252 aaKnown RBP13.39□□□□□ -0.27
LRRK1-202ENST00000525284 TAS2R1Q9NYW7 299 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 HPSEQ9Y251 543 aa13.39□□□□□ -0.27
LRRK1-202ENST00000525284 HHLA1C9JL84 531 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PIP5K1BO14986 540 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 CD72P21854 359 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PSMD8P48556 350 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 NCBP2P52298 156 aaKnown RBP eCLIP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 AARDQ4LEZ3 155 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SLC39A4Q6P5W5 647 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SLC15A3Q8IY34 581 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 NXPE1Q8N323 547 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 METTL25Q8N6Q8 603 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 ASCC1Q8N9N2 400 aaKnown RBP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 TOR1AIP2Q8NFQ8 470 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 OR8K3Q8NH51 312 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PHOX2BQ99453 314 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 RTFDC1Q9BY42 306 aaPredicted RBP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 MAN2C1Q9NTJ4 1040 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 ENPP3O14638 875 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 OIP5O43482 229 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 NFATC4Q14934 902 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PGM5Q15124 567 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 FAM174BQ3ZCQ3 159 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 RBM23Q86U06 439 aaKnown RBP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 HERC2P3Q9BVR0 1158 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 ZNF701Q9NV72 531 aaPredicted RBP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 CAMLGP49069 296 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 TARBP2Q15633 366 aaKnown RBP13.38□□□□□ -0.27
LRRK1-202ENST00000525284 CHST9Q7L1S5 443 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 OTOP3Q7RTS5 596 aa13.38□□□□□ -0.27
LRRK1-202ENST00000525284 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms