RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 LINC00052Q96N35 136 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 TTPALQ9BTX7 342 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 CNPPD1Q9BV87 410 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 TRIM45Q9H8W5 580 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 IFT46Q9NQC8 304 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 ING3Q9NXR8 418 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 NDRG4Q9ULP0 352 aaKnown RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF175Q9Y473 711 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 MGAMO43451 1857 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 RPS10-NUDT3A0A1W2PQS6 291 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 UBA6A0AVT1 1052 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 EFCAB10A6NFE3 127 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 CXCR6O00574 342 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 CNMDO75829 334 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 NFICP08651 508 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 FOSL1P15407 271 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 RPS19P39019 145 aaKnown RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 EPHA5P54756 1037 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 ERVK-21P61565 698 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 HERVK_113P63132 956 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 POU4F1Q01851 419 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 NRG1Q02297 640 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 CDH17Q12864 832 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 CAPSQ13938 189 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 NFE2L1Q14494 772 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 TBCEQ15813 527 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 TSTQ16762 297 aaKnown RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 PCID2Q5JVF3 399 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 RASAL3Q86YV0 1011 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 TMEM151BQ8IW70 566 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 DCBLD1Q8N8Z6 715 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 C1orf127Q8N9H9 656 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF548Q8NEK5 533 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 OR2T11Q8NH01 316 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 PROKR1Q8TCW9 393 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 L3HYPDHQ96EM0 354 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF578Q96N58 590 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 SEC22CQ9BRL7 303 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 TRMOQ9BU70 441 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 THUMPD3Q9BV44 507 aaKnown RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 DPCDQ9BVM2 203 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 ERVK-6Q9BXR3 956 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 MRPL4Q9BYD3 311 aaKnown RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 EXOSC4Q9NPD3 245 aaKnown RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 SEMA4BQ9NPR2 832 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-224ENST00000524126 GPR83Q9NYM4 423 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 VAPAQ9P0L0 249 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 REV1Q9UBZ9 1251 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 CYB5R1Q9UHQ9 305 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 ABCG2Q9UNQ0 655 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 VPS9D1Q9Y2B5 631 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 ACTL7AQ9Y615 435 aa9.93□□□□□ -0.82
SPIDR-224ENST00000524126 WDR81Q562E7 1941 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 SHROOM3Q8TF72 1996 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 A0A0G2JLL6 359 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-224ENST00000524126 ARVCFO00192 962 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 SYN3O14994 580 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 FABP7O15540 132 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CRCPO75575 148 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 SERPINA1P01009 418 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CXCL8P10145 99 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 LCP1P13796 627 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 GPC1P35052 558 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 TPMTP51580 245 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 RPP38P78345 283 aaKnown RBP9.92□□□□□ -0.82
SPIDR-224ENST00000524126 ZNF273Q14593 569 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 PFKFB4Q16877 469 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CPZQ66K79 652 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 ANKRD54Q6NXT1 300 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 PKN3Q6P5Z2 889 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 KLHL17Q6TDP4 642 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 LBX2Q6XYB7 198 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 PRRT2Q7Z6L0 340 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CNTN4Q8IWV2 1026 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 PHACTR4Q8IZ21 702 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 OR6C4Q8NGE1 309 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 BLOC1S5Q8TDH9 187 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 FCGR1BQ92637 280 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 GGHQ92820 318 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 OR5M11Q96RB7 305 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 PORCNQ9H237 461 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CDCP1Q9H5V8 836 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 MRM3Q9HC36 420 aaKnown RBP9.92□□□□□ -0.82
SPIDR-224ENST00000524126 SPATA6Q9NWH7 488 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-224ENST00000524126 FZD10Q9ULW2 581 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 ASB14A6NK59 587 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 FAM72CH0Y354 149 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 M0R129 80 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 RFPL3O75679 317 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 GPX5O75715 221 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 MT-CYBP00156 380 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-224ENST00000524126 PAHP00439 452 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 HOXB3P14651 431 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CD72P21854 359 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CPN2P22792 545 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 RPL35P42766 123 aaKnown RBP9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CHRNA4P43681 627 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 KCNQ1P51787 676 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 CLCNKAP51800 687 aa9.92□□□□□ -0.82
SPIDR-224ENST00000524126 SMSP52788 366 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms